Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000389.1 Hibiscus syriacus cultivar Beakdansim tig00000715_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2672246

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   

This is table  15  of  15  ( 1688 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2665319--2665356
15
2.3
16
86
13
51
44
0
0
55
0.99
2666115--2666152
14
2.6
15
84
15
53
63
2
0
34
1.09
2666537--2666584
23
2.1
23
84
0
60
37
12
16
33
1.86
2667326--2667388
23
2.7
23
92
0
99
38
20
4
36
1.74
2667780--2667864
38
2.2
38
91
4
136
17
14
21
47
1.83
2668117--2668153
18
2.1
18
89
0
56
51
10
5
32
1.60
2668775--2668835
21
2.7
23
80
10
72
37
19
6
36
1.78
2671601--2672246
177
3.6
180
91
5
1053
34
16
14
34
1.89

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15

The End!