Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008302.1 Hibiscus syriacus cultivar Beakdansim tig00110988_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3402722

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   

This is table  17  of  17  ( 1926 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3392278--3392407
49
2.7
49
93
2
217
52
16
6
25
1.66
3394108--3394165
22
2.8
20
82
12
73
34
15
20
29
1.94
3394122--3394200
22
3.7
21
86
5
106
36
13
20
29
1.91
3394519--3394675
55
2.9
55
93
0
262
36
11
16
35
1.85
3394972--3395059
46
1.9
46
85
0
122
46
10
17
26
1.79
3400880--3401000
52
2.3
54
89
2
183
28
6
23
41
1.79

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17

The End!