Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008463.1 Hibiscus syriacus cultivar Beakdansim tig00111276_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1833679

Tables:   1   2   3   4   5   6   7   8   9   10   11   

This is table  11  of  11  ( 1213 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1808973--1809060
42
2.1
42
82
4
106
19
21
15
43
1.88
1808974--1809060
43
2.0
43
84
4
113
19
21
14
43
1.87
1819563--1819666
21
4.9
21
83
5
97
39
19
40
0
1.58
1820004--1820272
43
6.2
42
71
11
134
29
20
20
29
1.97
1821712--1822067
82
4.4
80
77
10
305
33
19
17
30
1.94
1821705--1822074
161
2.3
164
83
3
428
32
19
17
30
1.95
1822323--1822362
16
2.5
16
100
0
80
50
0
37
12
1.41
1822704--1822739
18
2.0
18
100
0
72
22
5
27
44
1.75
1824187--1824231
22
2.0
24
91
8
76
46
6
4
42
1.50
1831628--1831671
22
2.0
22
86
8
63
38
11
11
38
1.77
1832001--1832025
13
1.9
13
100
0
50
28
16
8
48
1.74
1832414--1832582
85
2.0
84
82
5
198
40
15
22
20
1.90
1833106--1833130
12
2.1
12
100
0
50
36
8
8
48
1.62

Tables:   1   2   3   4   5   6   7   8   9   10   11

The End!