Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008654.1 Hibiscus syriacus cultivar Beakdansim tig00111648_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3533819

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   

This is table  18  of  18  ( 2052 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3519379--3519414
17
2.1
17
100
0
72
33
0
5
61
1.19
3523162--3523223
2
31.5
2
96
3
117
50
0
0
50
1.00
3526438--3526535
21
4.7
21
80
10
103
22
19
34
23
1.96
3526437--3526535
42
2.4
41
81
13
114
22
19
35
23
1.96
3529974--3530112
21
6.7
21
82
8
142
22
20
33
23
1.97
3529973--3530112
63
2.2
61
81
12
169
22
20
34
23
1.97
3530599--3530637
16
2.4
16
100
0
78
38
20
10
30
1.86
3530599--3530637
8
4.8
9
79
20
50
38
20
10
30
1.86
3530847--3530889
3
14.3
3
85
0
59
27
2
2
67
1.15
3531613--3531695
23
3.8
22
80
13
91
31
27
21
19
1.97
3531644--3531716
23
3.3
22
83
12
80
31
28
19
20
1.97
3531681--3531737
21
2.8
21
84
7
64
40
26
12
21
1.88

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18

The End!