Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold13
Parameters: 2 7 7 80 10 50 1000
Length:  2744999

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   

This is table  15  of  15  ( 1714 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2705280--2705354
20
3.8
20
85
3
98
41
13
14
30
1.84
2710710--2710747
19
2.0
19
89
0
58
28
5
31
34
1.80
2710743--2710784
21
2.0
22
95
4
77
71
0
28
0
0.86
2714225--2714353
52
2.5
52
93
0
222
27
18
17
35
1.94
2714410--2714505
13
5.7
18
71
28
86
37
17
11
33
1.86
2714403--2714503
32
3.1
32
95
1
175
36
17
10
34
1.85
2715992--2716051
26
2.3
26
85
2
86
25
30
21
23
1.99
2718351--2718399
26
1.9
25
87
4
71
26
38
10
24
1.87
2719242--2719268
14
1.9
14
100
0
54
33
14
14
37
1.88
2719223--2719287
33
1.9
33
87
9
96
29
15
15
40
1.88
2719252--2719308
19
2.9
20
86
5
89
33
15
15
35
1.90
2720392--2720530
62
2.2
62
85
2
181
28
28
15
27
1.96
2721305--2721343
18
2.2
18
100
0
78
51
5
5
38
1.46
2721951--2721991
18
2.4
17
88
8
64
73
2
24
0
0.96
2721959--2722016
14
4.1
14
82
13
66
77
3
18
0
0.91
2721958--2722025
24
2.8
24
82
14
79
77
2
19
0
0.89
2721975--2722029
26
2.1
27
86
10
78
78
1
20
0
0.85
2722369--2722394
4
6.5
4
100
0
52
23
0
0
76
0.78
2728695--2728732
19
1.9
19
89
5
58
34
0
2
63
1.09
2729287--2729331
22
2.0
22
86
4
63
51
0
0
48
1.00
2729860--2729903
19
2.6
16
82
10
52
63
2
4
29
1.26
2729944--2729973
16
1.9
16
93
6
53
36
13
10
40
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2730676--2730704
15
1.9
15
100
0
58
68
3
0
27
1.05
2731112--2731141
6
5.0
6
95
0
51
63
0
3
33
1.11
2731278--2731326
3
16.3
3
83
8
55
28
6
63
2
1.30
2735196--2735364
84
2.0
84
90
2
268
37
17
15
28
1.91
2741605--2741629
13
1.9
13
100
0
50
56
0
4
40
1.18
2743342--2743410
22
3.2
21
73
17
61
57
0
34
7
1.26
2743450--2743540
17
5.3
17
69
17
64
68
0
29
2
1.02
2743450--2743505
16
3.6
15
80
15
60
69
0
28
1
0.98
2743607--2743657
21
2.4
21
80
0
57
78
0
11
9
0.97
2743629--2743670
21
2.0
21
82
17
52
78
2
2
16
0.96
2744673--2744714
21
2.1
19
86
13
57
61
0
0
38
0.96
2744734--2744771
16
2.5
16
87
8
53
68
2
0
28
1.03

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15

The End!