Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002647.1 Hibiscus syriacus cultivar Beakdansim tig00005406_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7027529

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   

This is table  26  of  26  ( 3011 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7010922--7011117
16
11.6
16
73
14
94
34
2
61
1
1.19
7010918--7010969
14
3.6
14
82
10
59
34
0
65
0
0.93
7010929--7011118
24
7.7
24
70
15
93
33
2
62
1
1.18
7011016--7011118
8
12.1
9
72
15
69
33
2
63
0
1.16
7011030--7011176
6
24.2
6
68
20
74
32
2
63
2
1.17
7010922--7011111
18
10.8
18
75
8
110
34
2
61
1
1.19
7011093--7011148
17
3.2
17
80
11
69
28
0
66
5
1.14
7011030--7011145
18
6.4
18
80
12
105
30
2
64
2
1.20
7018014--7018148
42
3.2
42
69
15
100
37
17
14
30
1.90
7025558--7025667
45
2.5
43
81
10
107
30
17
12
40
1.87
7025558--7025685
43
2.9
43
78
10
100
30
17
12
39
1.86

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26

The End!