Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007782.1 Hibiscus syriacus cultivar Beakdansim tig00110065_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3900615

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   

This is table  19  of  19  ( 2174 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3893178--3893205
13
2.2
13
100
0
56
28
7
28
35
1.84
3893515--3893580
2
33.0
2
100
0
132
50
0
0
50
1.00
3894062--3894088
2
13.5
2
100
0
54
51
0
0
48
1.00
3894088--3894185
7
12.6
8
73
19
59
82
1
12
4
0.85
3894088--3894183
28
3.4
27
81
8
111
82
1
12
4
0.87
3894102--3894183
35
2.3
35
82
12
105
79
1
14
4
0.96
3894088--3894183
6
15.7
6
76
15
74
82
1
12
4
0.87
3894096--3894204
48
2.1
52
85
11
154
77
0
14
6
1.00
3894094--3894205
27
4.3
25
71
20
77
77
0
15
6
1.01
3897865--3898024
40
4.1
40
91
3
270
24
16
25
33
1.96
3897865--3898024
78
2.0
80
93
2
279
24
16
25
33
1.96
3898131--3898238
45
2.4
44
83
8
130
36
10
24
29
1.88
3898579--3898617
18
2.2
18
90
0
60
15
17
35
30
1.91
3898936--3899039
39
2.9
36
78
18
110
39
11
0
48
1.46

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19

The End!