Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008933.1 Hibiscus syriacus cultivar Beakdansim tig00112249_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2862162

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   

This is table  14  of  14  ( 1568 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2827901--2828017
58
2.0
58
94
0
207
32
11
19
35
1.89
2830524--2830563
18
2.2
18
90
0
62
20
47
20
12
1.81
2830562--2830608
10
5.5
8
82
14
51
14
34
27
23
1.94
2833028--2833143
24
4.8
24
89
4
171
25
16
18
39
1.91
2839938--2839965
2
14.0
2
100
0
56
50
0
0
50
1.00
2851276--2851338
30
2.1
29
82
8
74
53
15
12
17
1.72
2853462--2855603
7
308.9
7
98
1
4096
0
14
57
28
1.38
2855602--2862162
7
958.1
7
94
5
11504
14
0
42
42
1.47

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14

The End!