Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold103
Parameters: 2 7 7 80 10 50 1000
Length:  2633873

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   

This is table  21  of  21  ( 2458 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2544927--2544972
15
3.2
15
75
9
51
30
2
0
67
1.03
2556239--2556282
18
2.4
20
75
17
51
52
0
2
45
1.13
2556287--2556334
16
3.1
15
81
6
51
72
0
0
27
0.84
2556290--2556368
20
3.6
21
76
17
81
63
0
1
35
1.03
2556323--2556393
25
2.8
25
83
12
90
54
0
1
43
1.08
2556379--2556430
14
3.6
14
76
5
50
55
0
3
40
1.18
2556372--2556410
15
2.5
16
83
4
53
53
0
0
46
1.00
2556527--2556740
105
2.0
105
94
2
378
35
19
19
25
1.95
2562185--2562232
3
16.0
3
100
0
96
33
0
0
66
0.92
2563123--2563154
3
10.7
3
100
0
64
65
0
0
34
0.93
2564565--2564614
24
2.0
25
92
7
84
54
8
10
28
1.62
2567249--2567343
17
5.5
17
78
12
79
68
0
0
31
0.90
2567266--2567338
26
2.7
27
85
12
96
71
0
0
28
0.87
2567249--2567334
12
7.2
11
74
22
50
68
0
0
31
0.90
2567447--2567500
17
3.2
17
69
23
51
53
0
1
44
1.11
2567832--2567860
6
4.8
6
100
0
58
31
17
34
17
1.93
2570087--2570131
19
2.4
19
85
7
65
71
0
0
28
0.87
2570534--2570591
29
2.0
29
93
0
98
36
1
25
36
1.67
2572106--2572151
11
4.5
11
81
13
53
67
0
0
32
0.91
2572150--2572202
27
2.0
26
88
7
79
41
1
1
54
1.22
2573353--2573379
2
13.5
2
100
0
54
48
0
0
51
1.00
2588529--2588565
17
2.1
19
85
14
53
48
0
10
40
1.38
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2588529--2588565
18
2.1
18
90
5
58
48
0
10
40
1.38
2589925--2589960
5
7.2
5
93
0
54
33
0
61
5
1.19
2593017--2593060
16
2.6
17
85
7
54
38
2
0
59
1.10
2593227--2593256
15
2.0
15
100
0
60
53
6
0
40
1.27
2593471--2593517
23
2.0
23
83
4
58
14
4
0
80
0.85
2594422--2594464
13
3.2
13
81
15
52
53
0
0
46
1.00
2595981--2596007
2
13.5
2
100
0
54
51
48
0
0
1.00
2596007--2596039
2
16.5
2
100
0
66
51
0
0
48
1.00
2596169--2596212
2
22.5
2
81
4
54
43
2
4
50
1.35
2596322--2596350
2
14.5
2
100
0
58
51
0
0
48
1.00
2597562--2597618
28
2.0
28
82
0
69
35
17
14
33
1.90
2600016--2600048
16
1.9
18
88
11
52
21
9
9
60
1.54
2605435--2605478
17
2.6
17
85
0
52
52
2
0
45
1.13
2605709--2605755
14
3.3
14
78
21
53
25
0
2
72
0.96
2605775--2605808
18
1.9
18
94
5
61
55
0
2
41
1.15
2609626--2609658
2
16.5
2
100
0
66
51
0
0
48
1.00
2609870--2610168
151
2.0
147
96
2
553
28
21
8
41
1.82
2611881--2611909
2
14.5
2
100
0
58
51
0
0
48
1.00
2612207--2612275
31
2.4
28
82
7
84
50
0
1
47
1.09
2612189--2612319
71
1.9
70
83
9
171
54
0
0
45
1.05
2612222--2612285
26
2.3
28
77
15
71
48
0
0
51
1.00
2612429--2612500
34
2.1
34
82
10
85
48
0
2
48
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2612336--2612548
108
2.0
109
82
9
265
53
2
1
42
1.24
2612784--2612822
20
1.9
21
89
5
62
28
2
0
69
1.02
2612848--2612897
26
1.9
26
84
8
66
48
0
2
50
1.12
2612704--2612934
124
1.9
116
82
13
277
41
1
2
54
1.22
2613433--2613606
89
2.0
88
91
1
285
41
6
17
35
1.75
2613550--2613668
57
2.1
58
93
1
204
37
10
20
31
1.86
2613413--2613837
234
1.8
235
84
4
590
41
7
16
34
1.78
2613607--2614128
88
5.9
88
85
5
633
41
8
16
33
1.78
2614062--2614453
70
5.6
70
92
1
601
42
8
17
31
1.79
2616256--2616281
7
3.7
7
100
0
52
11
0
42
46
1.40
2620260--2620296
16
2.3
17
81
13
51
59
0
0
40
0.97
2619942--2620311
124
3.0
124
81
11
470
52
1
2
42
1.26
2620877--2620907
12
2.5
12
94
5
53
64
0
0
35
0.94
2624008--2624047
2
20.0
2
100
0
80
50
0
0
50
1.00

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21

The End!