Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold57
Parameters: 2 7 7 80 10 50 1000
Length:  4071704

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   

This is table  27  of  27  ( 3137 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4028085--4028130
15
3.1
15
87
9
67
50
0
4
45
1.21
4028089--4028130
21
2.0
21
95
0
75
50
0
2
47
1.14
4029047--4029072
2
13.0
2
100
0
52
50
0
0
50
1.00
4030070--4030098
2
14.5
2
100
0
58
48
0
0
51
1.00
4034736--4034779
2
22.5
2
95
4
81
50
0
0
50
1.00
4039538--4039577
19
2.1
19
100
0
80
22
20
25
32
1.98
4042460--4042508
25
2.0
25
100
0
98
51
16
12
20
1.76
4045921--4045967
17
2.5
20
76
13
55
48
2
4
44
1.34
4046248--4046306
21
2.7
21
78
7
64
37
1
0
61
1.07
4047075--4047114
12
3.2
12
83
16
55
22
0
7
70
1.12
4047769--4047814
17
2.7
18
74
16
53
43
0
6
50
1.28
4059978--4060014
12
2.8
14
80
16
51
64
5
0
29
1.15
4059992--4060076
36
2.3
38
82
13
108
57
2
0
40
1.11
4061848--4061888
3
13.7
3
100
0
82
65
0
0
34
0.93
4062720--4062745
2
13.0
2
100
0
52
50
50
0
0
1.00
4064708--4064959
126
2.0
126
100
0
504
42
12
15
29
1.84
4067659--4067707
22
2.2
22
96
0
89
32
12
16
38
1.86

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27

The End!