Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008217.1 Hibiscus syriacus cultivar Beakdansim tig00110847_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2417150

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   

This is table  14  of  14  ( 1575 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2391028--2391076
18
2.7
18
83
0
62
18
22
28
30
1.97
2392093--2392176
32
2.6
32
90
3
125
30
11
15
41
1.83
2392302--2392429
40
3.2
40
79
0
139
39
17
18
24
1.91
2392379--2392529
80
1.9
79
85
0
203
40
18
16
24
1.91
2394548--2394783
40
5.9
40
68
10
160
35
12
21
30
1.91
2394573--2394825
80
3.2
79
84
3
267
35
13
21
29
1.92
2396449--2396507
31
1.9
31
85
0
82
37
18
11
32
1.87
2405495--2405663
60
2.8
59
78
9
171
34
20
5
39
1.75
2405912--2405941
3
10.0
3
100
0
60
0
33
0
66
0.92
2409088--2409129
22
1.9
22
85
9
59
38
0
33
28
1.58
2409910--2409981
26
2.8
26
91
0
117
15
19
29
36
1.92
2410953--2411110
60
2.7
59
80
3
147
40
4
20
34
1.73
2414636--2414704
32
2.2
31
82
7
84
33
18
13
34
1.90
2414645--2414705
32
1.9
32
89
0
95
36
18
11
34
1.86
2415890--2415949
21
2.9
21
97
0
111
21
28
18
31
1.97

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14

The End!