Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold156
Parameters: 2 7 7 80 10 50 1000
Length:  2697547

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   

This is table  14  of  14  ( 1602 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2621744--2621824
39
2.1
37
80
14
94
58
1
1
39
1.14
2622796--2622833
2
19.0
2
94
0
67
47
0
2
50
1.15
2625594--2625623
2
15.0
2
100
0
60
50
0
0
50
1.00
2627052--2627104
27
1.9
28
81
11
65
47
0
0
52
1.00
2628138--2628180
17
2.5
16
82
14
50
48
0
0
51
1.00
2636040--2636065
2
13.0
2
100
0
52
50
0
50
0
1.00
2647275--2647389
30
3.9
29
82
5
135
37
0
3
58
1.21
2655367--2655409
15
2.9
15
79
10
52
51
0
0
48
1.00
2657936--2657973
15
2.4
16
86
4
51
52
2
0
44
1.14
2659373--2659406
15
2.1
17
89
10
54
38
5
11
44
1.65
2660958--2661002
19
2.3
19
80
3
63
48
0
0
51
1.00
2661238--2661302
16
4.1
15
76
9
58
53
0
0
46
1.00
2668657--2668707
3
17.0
3
91
0
84
0
29
0
70
0.87
2673545--2673587
23
1.9
22
90
4
68
48
0
0
51
1.00
2673529--2673598
33
2.2
31
85
7
88
45
0
0
54
0.99
2673583--2673612
11
2.6
11
94
5
51
33
0
0
66
0.92
2673554--2673604
19
2.7
18
81
6
57
45
0
0
54
0.99
2673580--2673646
19
3.6
17
79
15
62
32
0
0
67
0.91
2674322--2674364
19
2.3
19
88
4
61
23
0
2
74
0.93
2675274--2675353
19
4.2
19
70
19
67
66
0
1
32
1.00
2675276--2675381
17
6.3
16
72
15
74
62
0
0
35
1.08
2675279--2675360
25
3.2
25
81
15
80
62
0
1
36
1.03
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2675314--2675378
32
2.1
31
85
8
87
58
1
0
40
1.07
2675866--2675956
49
1.9
47
83
16
118
48
0
2
49
1.13
2675886--2676009
23
4.7
26
75
15
89
54
1
2
41
1.23
2676857--2676881
11
2.3
11
100
0
50
68
0
0
32
0.90
2677184--2677233
19
2.7
19
79
11
59
44
0
2
54
1.11
2678136--2678169
3
11.3
3
100
0
68
0
35
0
64
0.94
2678193--2678226
6
5.7
6
100
0
68
0
64
0
35
0.94
2678193--2678232
18
2.2
18
90
0
62
2
60
2
35
1.24
2678518--2678562
6
7.5
6
89
0
72
20
31
13
35
1.91
2681549--2681581
2
16.0
2
93
6
57
48
0
3
48
1.17
2682103--2682166
22
2.9
22
77
9
69
53
0
0
46
1.00
2682117--2682164
15
3.2
15
80
8
53
50
0
0
50
1.00
2682141--2682185
18
2.6
17
80
13
56
53
2
0
44
1.13
2683448--2683472
1
25.0
1
100
0
50
0
0
100
0
0.00
2684438--2684479
2
21.0
2
100
0
84
50
0
0
50
1.00
2686129--2686169
18
2.2
20
86
8
59
68
7
2
21
1.26
2686107--2686175
30
2.3
30
78
7
88
69
5
1
23
1.18
2690608--2690671
30
2.1
30
100
0
128
48
6
15
29
1.70
2694016--2694049
17
2.0
17
88
0
50
44
2
0
52
1.16
2696884--2696945
20
3.1
20
76
19
58
41
0
0
58
0.98

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14

The End!