Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold69
Parameters: 2 7 7 80 10 50 1000
Length:  2104606

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   

This is table  13  of  13  ( 1482 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2039669--2039770
42
2.4
42
90
0
150
21
23
21
33
1.97
2039511--2039790
139
2.0
140
81
7
329
18
26
18
37
1.93
2040011--2040261
95
2.6
96
84
2
308
18
29
18
33
1.95
2040414--2040803
85
4.6
85
87
2
525
17
25
19
37
1.93
2040414--2040813
169
2.4
168
85
3
514
17
25
19
37
1.93
2040196--2040813
85
7.3
85
79
6
506
17
26
19
36
1.94
2040257--2040979
382
1.9
383
82
3
918
17
26
19
36
1.94
2040187--2040979
85
9.3
84
77
7
471
18
26
19
36
1.94
2041661--2041702
16
2.7
15
82
13
50
73
0
0
26
0.83
2042676--2042713
13
2.9
13
84
11
51
73
0
0
26
0.83
2043763--2043807
20
2.3
20
88
3
65
71
0
24
4
1.05
2047911--2047975
33
2.0
33
90
0
103
30
15
15
38
1.88
2053113--2053146
16
2.1
16
94
0
59
44
0
2
52
1.16
2053438--2053833
196
2.0
196
90
1
616
38
10
14
36
1.80
2054738--2054771
14
2.4
14
95
0
59
8
5
2
82
0.93
2054946--2054979
3
11.3
3
93
0
59
64
0
2
32
1.08
2061109--2061135
13
2.1
13
100
0
54
44
0
0
55
0.99
2065106--2065153
17
2.8
17
74
3
51
33
0
0
66
0.92
2065292--2065372
35
2.2
36
82
8
103
39
7
1
51
1.38
2066334--2066373
19
2.1
19
90
4
62
57
0
0
42
0.98
2067475--2067525
22
2.4
22
80
9
61
52
1
0
45
1.12
2067751--2067790
20
2.0
20
85
0
53
50
2
7
40
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2070762--2070849
37
2.4
37
82
3
97
47
15
5
30
1.69
2071984--2072036
22
2.4
23
84
9
67
15
5
5
73
1.21
2076270--2076313
23
1.9
23
100
0
88
18
25
15
40
1.90
2081177--2081204
2
14.0
2
100
0
56
50
0
0
50
1.00
2082457--2082506
12
4.2
12
85
12
68
2
24
0
74
0.93
2082458--2082504
24
2.0
24
91
0
76
2
25
0
72
0.96
2083107--2083524
164
2.5
163
83
4
500
51
9
10
29
1.66
2087545--2087615
12
5.9
12
79
0
79
21
12
18
47
1.81
2087553--2087627
36
2.1
36
89
0
114
21
13
17
48
1.81
2087545--2087615
24
3.0
24
78
0
88
21
12
18
47
1.81
2088755--2088792
20
1.9
20
94
0
67
34
28
26
10
1.90
2088757--2088801
20
2.2
20
88
0
63
35
28
24
11
1.90
2089955--2090004
3
16.7
3
100
0
100
66
0
0
34
0.92
2093512--2093547
18
2.0
18
89
10
56
69
0
0
30
0.89
2093814--2093889
37
2.0
38
82
12
95
64
5
0
30
1.15
2095087--2095111
1
25.0
1
100
0
50
0
100
0
0
0.00
2100555--2100600
20
2.3
20
84
0
56
34
4
47
13
1.62
2102165--2102192
3
9.3
3
100
0
56
64
0
0
35
0.94
2103008--2103049
12
3.6
11
79
20
50
38
2
0
59
1.10
2103092--2103152
27
2.2
28
75
22
65
59
3
6
31
1.39

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13

The End!