Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold76
Parameters: 2 7 7 80 10 50 1000
Length:  2182696

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   

This is table  13  of  13  ( 1456 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2165267--2165348
40
2.0
40
95
0
146
41
23
8
26
1.83
2166035--2166064
12
2.4
13
94
5
53
6
26
0
66
1.16
2166015--2166081
9
6.9
9
72
21
55
11
23
1
62
1.37
2166038--2166081
21
2.1
21
86
0
61
9
25
0
65
1.21
2166328--2166589
130
2.0
130
96
0
488
33
21
15
29
1.94
2178017--2178041
13
1.9
13
100
0
50
32
16
16
36
1.90
2177996--2178060
32
2.0
32
96
0
121
36
16
12
33
1.87
2177998--2178081
19
4.7
19
80
18
108
36
17
11
33
1.87
2179289--2179314
13
2.0
13
100
0
52
30
15
15
38
1.88
2179269--2179332
32
2.0
33
90
3
103
28
14
18
39
1.90
2179269--2179339
19
4.0
18
72
25
62
26
12
21
39
1.89
2180008--2180078
19
3.7
19
82
1
88
30
16
12
39
1.86
2180906--2180986
42
1.9
42
97
0
153
27
23
12
37
1.90
2181479--2181513
10
3.4
10
92
4
52
2
20
0
77
0.90
2181810--2181838
13
2.1
14
93
6
51
79
0
0
20
0.74
2182017--2182550
163
3.4
158
80
9
540
49
7
13
29
1.69

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13

The End!