Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009586.1 Hibiscus syriacus cultivar Beakdansim tig00116964_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3773412

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   

This is table  19  of  19  ( 2170 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3761293--3761345
25
2.1
25
86
6
72
20
11
1
66
1.33
3763412--3763546
72
1.9
72
85
3
191
25
20
18
35
1.95
3764893--3765024
42
3.3
41
68
16
123
30
15
23
30
1.96
3764887--3765032
78
1.9
78
97
0
274
30
15
22
30
1.95
3765868--3765924
22
2.6
22
91
5
89
35
12
12
40
1.80
3766557--3766962
45
8.7
47
88
3
499
30
21
19
28
1.98
3767298--3767337
14
2.9
14
85
7
55
22
2
0
75
0.93
3767341--3767365
2
12.5
2
100
0
50
48
0
0
52
1.00
3768610--3768653
15
3.0
15
93
3
72
22
6
6
63
1.43
3768626--3768702
25
2.9
27
79
12
81
31
6
2
59
1.36

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19

The End!