Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold184
Parameters: 2 7 7 80 10 50 1000
Length:  2218657

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   

This is table  13  of  13  ( 1455 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2195740--2195985
128
1.9
126
84
5
325
32
12
25
29
1.92
2195815--2195928
49
2.3
51
84
3
169
32
9
26
31
1.88
2198311--2198364
20
2.7
20
91
5
83
42
14
16
25
1.87
2198383--2198455
20
3.7
20
88
3
103
41
13
16
28
1.87
2198801--2198969
79
2.1
79
80
6
182
28
21
14
34
1.93
2198906--2199020
51
2.3
51
84
6
144
29
18
13
38
1.89
2203586--2203614
14
2.0
15
93
6
51
55
0
10
34
1.34
2206229--2206287
23
2.7
22
78
5
66
44
0
1
54
1.10
2206229--2206289
15
4.1
14
77
14
61
44
0
1
54
1.10
2207423--2207467
7
6.4
7
92
0
63
51
0
8
40
1.33
2207434--2207484
14
3.9
14
72
15
54
54
0
3
41
1.19
2207802--2207841
20
2.1
19
86
13
55
40
0
0
60
0.97
2208213--2208253
16
2.7
15
88
7
64
21
4
9
63
1.44
2210020--2210058
20
1.9
21
89
5
62
23
2
12
61
1.43
2210271--2210315
23
2.0
23
90
0
72
42
2
0
55
1.12

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13

The End!