Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold192
Parameters: 2 7 7 80 10 50 1000
Length:  2196177

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   

This is table  14  of  14  ( 1592 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2151716--2152078
177
2.0
178
86
4
502
28
26
15
29
1.96
2152284--2152622
44
7.7
43
74
6
277
23
23
14
38
1.92
2152088--2152628
132
4.1
132
85
1
674
22
22
14
40
1.90
2153607--2154000
79
5.0
79
73
9
313
37
12
23
26
1.90
2153597--2153997
158
2.5
157
79
7
420
38
11
22
26
1.89
2153971--2154019
20
2.4
20
82
3
62
51
6
16
26
1.68
2153992--2154171
76
2.3
76
84
8
222
37
12
22
27
1.91
2156982--2157131
47
3.2
47
87
0
203
23
24
15
36
1.93
2157013--2157221
47
4.5
46
78
3
161
19
23
16
40
1.91
2158481--2158534
20
2.7
20
85
2
72
38
9
14
37
1.79
2158635--2158677
20
2.2
20
100
0
86
30
13
9
46
1.75
2160794--2161038
97
2.6
93
76
7
217
28
23
11
36
1.89
2165719--2165776
21
2.8
21
78
0
62
32
22
3
41
1.71
2165786--2165897
52
2.1
53
96
1
208
36
5
14
43
1.68
2174043--2174103
32
1.9
32
83
6
79
54
8
1
36
1.40
2174542--2174579
19
2.1
19
90
5
60
73
0
0
26
0.83
2174542--2174593
19
2.7
18
82
14
59
73
0
0
26
0.84
2175515--2175548
16
2.0
17
88
11
52
61
0
2
35
1.11
2178932--2178973
21
2.0
21
86
9
59
42
0
2
54
1.13
2179322--2179361
18
2.2
19
86
8
57
40
0
0
60
0.97
2183702--2183879
89
2.0
89
96
0
329
40
10
19
29
1.85
2184676--2184750
29
2.5
30
86
2
107
42
6
2
48
1.43
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2184767--2184827
15
3.9
17
68
14
51
57
1
6
34
1.34
2184777--2184833
30
1.9
29
89
3
87
63
1
5
29
1.27
2186283--2186338
15
3.6
15
73
21
53
46
1
0
51
1.11
2186672--2186704
14
2.2
16
89
10
52
48
0
0
51
1.00
2193310--2193363
22
2.5
22
96
3
101
61
9
11
18
1.55
2194279--2194353
20
3.8
20
76
0
69
41
10
12
36
1.77
2194276--2194353
40
2.0
39
87
2
111
41
11
11
35
1.78
2194961--2196109
28
40.0
28
82
9
1162
21
18
31
27
1.97
2194910--2196109
87
13.9
85
82
8
1297
22
18
31
27
1.97
2194962--2196167
115
10.5
115
82
8
1209
21
18
32
27
1.97

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14

The End!