Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold228
Parameters: 2 7 7 80 10 50 1000
Length:  4123243

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   

This is table  27  of  27  ( 3133 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4108103--4108155
25
2.1
26
86
10
74
28
0
0
71
0.86
4108107--4108161
25
2.2
25
84
12
69
25
0
0
74
0.82
4111397--4111454
14
4.3
14
76
22
61
12
6
15
65
1.45
4112164--4112247
28
2.9
28
72
13
71
52
2
2
42
1.27
4112305--4112350
22
2.0
23
83
4
58
56
4
4
34
1.39
4112300--4112352
22
2.5
22
76
14
56
52
3
3
39
1.37
4113576--4113621
3
15.3
3
100
0
92
32
0
0
67
0.91
4114931--4114974
20
2.1
22
91
8
74
29
9
20
40
1.83
4115028--4115053
13
2.0
13
100
0
52
30
15
15
38
1.88
4115008--4115071
33
2.0
32
87
9
94
28
14
17
40
1.88
4115008--4115071
32
2.0
33
87
9
96
28
14
17
40
1.88
4115962--4116005
20
2.0
20
87
12
61
63
13
9
13
1.51
4117626--4117664
13
3.0
13
92
0
60
38
15
15
30
1.88

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27

The End!