Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: Chr4 Parameters: 2 7 7 80 10 50 1000 Length: 30015117

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   

This is table  30  of  85  ( 10117 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10016829--10016885
19
3.0
20
82
10
66
56
0
3
40
1.17
10017282--10017336
21
2.6
22
80
11
62
52
1
0
45
1.11
10017293--10017336
22
2.0
21
87
12
63
54
2
0
43
1.12
10017719--10017782
29
2.2
29
83
5
76
29
7
7
54
1.57
10018259--10018315
19
3.0
20
82
10
66
56
0
3
40
1.17
10019397--10019431
16
2.2
16
89
0
52
25
8
8
57
1.57
10044299--10044520
93
2.3
96
84
3
279
41
2
16
38
1.63
10044559--10044849
126
2.3
126
92
1
485
32
19
21
26
1.97
10048545--10048582
18
2.1
18
90
0
58
42
10
26
21
1.85
10048655--10048716
30
2.1
30
84
0
79
9
12
45
32
1.75
10049230--10049269
7
5.7
7
100
0
80
57
15
0
27
1.38
10050377--10050437
29
2.2
29
85
5
81
54
3
3
39
1.33
10050439--10050470
11
2.9
11
100
0
64
37
0
34
28
1.57
10050439--10050494
22
2.6
22
78
16
64
41
0
32
26
1.56
10055707--10056053
95
3.7
95
97
1
644
36
8
5
49
1.58
10067142--10067183
13
3.3
12
87
9
57
42
7
14
35
1.73
10073229--10073275
25
2.0
23
87
8
67
36
4
4
55
1.39
10079267--10079506
101
2.4
101
92
0
417
27
24
16
31
1.96
10079267--10079504
33
7.1
33
67
7
129
28
24
16
31
1.96
10080344--10080382
20
2.0
20
85
5
53
30
7
2
58
1.39
10094847--10094925
38
2.1
38
90
6
126
77
8
6
7
1.13
10097164--10097441
87
3.2
87
89
2
398
28
23
24
23
2.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10097176--10097396
45
5.1
43
66
16
116
27
25
23
23
2.00
10097251--10097388
45
3.1
45
68
8
122
30
24
23
21
1.99
10097778--10097939
44
3.7
44
73
7
125
29
17
24
27
1.98
10103541--10103885
106
3.2
111
89
4
515
34
17
13
33
1.90
10104405--10104461
19
2.9
19
71
2
51
33
7
1
57
1.36
10104386--10104445
27
2.2
28
80
11
70
28
5
0
66
1.12
10105309--10105363
28
2.0
28
82
7
67
54
1
7
36
1.39
10112022--10112198
46
3.8
46
87
0
264
36
9
24
29
1.87
10116924--10117003
25
3.2
25
80
7
83
30
11
23
35
1.90
10119227--10119453
94
2.4
92
88
5
330
37
21
11
30
1.88
10119595--10119646
17
2.8
18
75
18
54
73
1
0
25
0.94
10119767--10119832
10
6.7
9
72
17
51
31
1
3
63
1.19
10119767--10119821
21
2.7
20
85
2
65
32
1
1
63
1.15
10119786--10119831
20
2.3
20
77
3
58
36
0
2
60
1.09
10120669--10120855
84
2.2
83
84
2
248
33
11
20
34
1.88
10120669--10120876
84
2.4
84
84
4
231
31
11
20
36
1.89
10124442--10124479
18
2.1
18
95
0
67
42
21
13
23
1.88
10129300--10129332
14
2.3
15
89
5
50
27
15
33
24
1.95
10130655--10131190
89
6.0
89
89
0
768
29
26
21
22
1.99
10131320--10131433
44
2.6
44
82
10
144
29
19
24
26
1.98
10132211--10132257
25
1.9
24
83
12
60
36
4
8
51
1.52
10145253--10145299
23
2.0
23
100
0
94
12
23
17
46
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10146830--10146862
14
2.3
15
85
15
52
54
9
0
36
1.32
10152976--10153042
22
3.3
21
65
26
54
44
23
4
26
1.72
10152912--10153046
39
3.5
39
89
0
207
46
20
4
28
1.70
10163812--10163885
27
2.7
27
95
2
130
44
8
1
45
1.41
10164121--10164159
19
2.0
21
85
10
55
23
0
10
66
1.22
10164205--10164239
3
11.3
3
87
6
52
31
0
5
62
1.18
10164238--10164272
3
11.7
3
100
0
70
0
0
31
68
0.90
10170187--10171016
3
276.7
3
100
0
1660
66
0
0
33
0.92
10171429--10171495
31
2.2
30
86
2
89
41
2
10
44
1.54
10173008--10173080
29
2.5
29
84
8
96
24
10
17
46
1.80
10173238--10173388
59
2.5
60
83
10
177
45
9
9
35
1.70
10189857--10189948
40
2.3
41
89
9
145
31
3
0
65
1.09
10190230--10190293
33
2.0
30
82
8
74
46
3
6
43
1.44
10192038--10192081
15
3.0
15
76
6
54
54
2
0
43
1.12
10192530--10192630
27
3.7
27
82
1
130
32
23
7
35
1.84
10194162--10194202
18
2.3
18
86
0
55
60
4
29
4
1.38
10195757--10195946
39
4.8
39
92
2
283
35
24
24
15
1.94
10195757--10195970
78
2.7
77
84
7
268
36
24
21
16
1.94
10196009--10196242
41
5.7
41
89
3
328
23
24
23
28
1.99
10196864--10196906
7
6.1
7
86
0
59
20
0
48
30
1.50
10196867--10196916
21
2.3
22
82
3
66
20
2
44
34
1.63
10197155--10197189
17
2.1
17
100
0
70
48
0
5
45
1.26
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10197238--10197275
13
2.8
14
88
8
60
57
0
5
36
1.21
10197592--10197852
128
2.0
130
96
2
481
14
28
14
41
1.86
10201695--10201827
68
2.0
67
91
4
216
40
6
10
42
1.64
10201806--10202118
43
7.3
43
84
2
326
20
18
30
30
1.97
10206581--10206645
32
2.0
32
82
11
80
27
23
23
26
2.00
10207626--10207665
20
2.0
20
85
0
53
47
0
15
37
1.45
10208167--10208264
24
4.0
24
74
7
81
19
22
18
39
1.92
10208173--10208235
24
2.6
24
87
2
90
15
26
20
36
1.93
10208326--10208398
27
2.8
25
80
8
83
19
28
21
30
1.98
10208410--10208479
25
2.8
25
80
2
77
22
22
21
32
1.98
10217349--10217446
44
2.2
45
85
5
128
36
29
5
28
1.79
10223625--10223722
44
2.2
45
85
5
128
36
29
5
28
1.79
10226950--10226980
16
2.0
15
93
6
53
70
6
3
19
1.22
10233138--10233327
101
1.9
99
82
6
240
26
23
15
33
1.95
10233543--10233571
2
14.5
2
100
0
58
51
48
0
0
1.00
10240233--10240271
14
2.8
14
84
0
51
61
2
0
35
1.10
10240426--10240478
19
2.7
19
82
2
61
67
11
0
20
1.21
10242778--10242819
20
2.2
19
91
4
66
38
9
11
40
1.75
10243408--10243582
87
2.0
87
98
0
341
39
25
6
29
1.80
10248192--10248610
140
3.0
140
99
0
820
33
11
21
34
1.89
10251382--10251420
18
2.2
17
86
13
53
33
0
20
46
1.51
10251646--10251721
23
3.3
23
88
0
125
23
21
25
30
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10264927--10264970
22
2.0
22
82
13
54
61
2
4
31
1.28
10265344--10265389
22
2.0
23
95
4
85
21
10
4
63
1.44
10265776--10265933
31
5.4
30
66
19
100
44
12
18
24
1.84
10265774--10265933
58
2.8
57
91
1
248
44
11
18
25
1.84
10265807--10265903
27
3.4
27
67
25
83
43
11
19
25
1.84
10265774--10265912
27
4.9
27
66
13
73
45
11
19
23
1.83
10266178--10266227
21
2.4
21
80
12
59
46
2
0
52
1.12
10274717--10274754
20
1.9
20
94
0
67
47
10
0
42
1.38
10274710--10274744
12
2.9
12
91
0
52
48
11
2
37
1.54
10285031--10285055
13
1.9
13
100
0
50
32
16
8
44
1.76
10285106--10285143
14
2.7
14
88
12
60
39
0
0
60
0.97
10286745--10286803
22
2.7
22
94
0
109
28
13
16
40
1.87
10288318--10288361
23
1.9
23
95
0
79
54
9
20
15
1.68
10288392--10288426
15
2.4
15
90
4
54
48
0
8
42
1.33
10291924--10292236
43
7.3
43
87
2
398
28
32
19
20
1.97
10296931--10296975
7
6.4
7
81
0
54
33
44
0
22
1.53
10296923--10296971
21
2.3
21
85
0
62
30
44
0
24
1.54
10298879--10298965
45
1.9
45
90
0
138
26
17
21
34
1.95
10303253--10303339
5
17.4
5
72
17
56
18
3
1
77
0.98
10303308--10303354
12
3.9
12
76
17
53
23
6
0
70
1.10
10303500--10303558
21
2.7
22
89
2
84
23
50
10
15
1.74
10303753--10303811
21
2.7
22
89
2
84
23
50
10
15
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10303364--10303871
253
2.0
254
99
0
1009
37
30
9
22
1.86
10304925--10304969
20
2.3
19
85
14
56
75
2
0
22
0.91
10304919--10304973
27
2.0
28
82
10
69
72
5
0
21
1.04
10304929--10304973
23
1.9
23
90
4
72
75
2
0
22
0.91
10304925--10304973
14
3.4
14
79
17
55
75
2
0
22
0.90
10304928--10304988
24
2.6
24
81
2
79
73
1
1
22
1.01
10308754--10308934
21
8.6
21
75
2
148
46
15
20
17
1.84
10309400--10309434
17
1.9
18
88
11
54
42
8
0
48
1.33
10310431--10310487
16
3.6
16
95
0
87
29
0
36
33
1.58
10310733--10310767
18
2.0
17
88
5
52
54
0
0
45
0.99

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85