Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: chr8
Parameters: 2 7 7 80 10 50 1000
Length:  19593398

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   

This is table  50  of  50  ( 5896 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19555895--19555971
28
2.7
29
84
6
86
10
9
46
33
1.70
19555928--19556004
29
2.7
29
80
11
72
9
7
48
35
1.64
19563862--19563934
7
10.1
7
88
5
110
15
0
45
39
1.46
19563862--19563932
37
1.9
36
91
2
115
15
0
43
40
1.47
19570251--19570289
18
2.2
18
95
0
69
15
12
0
71
1.14
19571229--19571286
21
2.8
21
94
0
98
12
24
48
15
1.79
19571425--19571748
7
46.7
7
84
7
180
6
1
53
38
1.35
19571616--19571698
20
4.1
20
90
1
121
2
0
63
33
1.07
19577586--19577646
14
4.3
14
80
2
59
9
8
32
49
1.66
19577593--19577635
21
2.0
21
86
0
59
9
11
32
46
1.72
19577628--19577691
8
8.4
8
82
6
71
10
1
39
48
1.48
19577606--19577688
15
5.6
15
71
7
71
12
3
37
46
1.58
19577690--19578964
7
183.3
7
93
4
1958
12
0
45
42
1.42
19586208--19586541
7
47.6
7
86
8
403
14
2
43
38
1.60
19586548--19586574
1
27.0
1
100
0
54
0
0
0
100
0.00
19593357--19593397
7
5.7
7
94
5
73
12
0
41
46
1.41

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50

The End!