Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: chr6
Parameters: 2 7 7 80 10 50 1000
Length:  26303135

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   

This is table  66  of  66  ( 7821 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26295126--26295193
30
2.3
30
79
5
75
38
1
16
44
1.57
26295141--26295191
10
5.0
10
90
2
75
39
1
19
39
1.63
26295169--26295249
30
2.7
30
79
9
85
39
2
17
40
1.63
26295190--26295248
29
2.0
29
87
6
84
38
3
15
42
1.63
26295230--26295330
10
10.3
10
68
8
55
29
1
18
49
1.59
26295337--26295376
21
1.9
21
84
0
53
27
2
20
50
1.61
26295416--26295483
23
3.0
22
78
8
66
29
1
11
57
1.43
26295391--26295483
22
4.2
21
72
13
71
29
1
12
56
1.43
26295528--26295588
7
8.9
7
80
3
70
16
0
40
42
1.48
26295593--26295641
21
2.3
22
85
3
64
6
6
55
32
1.49
26299220--26299306
7
12.8
6
76
20
66
14
5
49
29
1.67
26299226--26299306
14
5.8
13
80
11
90
16
4
49
29
1.66
26302810--26303053
7
34.4
7
73
10
129
12
3
45
38
1.59
26302903--26302970
22
3.2
21
73
19
61
14
0
41
44
1.45
26302917--26303007
15
6.3
15
73
17
77
16
2
38
42
1.60
26302902--26303048
34
4.1
36
76
8
97
12
2
44
40
1.54
26302902--26303077
21
8.2
21
72
11
99
13
2
47
37
1.55
26303036--26303069
7
4.9
7
96
0
50
14
0
64
20
1.28
26303027--26303103
14
5.4
14
79
11
68
12
5
58
23
1.55
26303037--26303103
29
2.3
29
80
10
75
11
5
61
20
1.51
26303023--26303109
14
6.1
14
76
17
63
12
4
57
25
1.54

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66

The End!