Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr12
Parameters: 2 7 7 80 10 50 1000
Length:  24583705

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   

This is table  75  of  75  ( 8944 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24428015--24428065
17
3.1
16
76
23
52
56
0
3
39
1.18
24428997--24429034
17
2.2
18
90
4
60
52
0
2
44
1.14
24429728--24429773
17
2.5
19
83
16
62
32
8
0
58
1.28
24431438--24431709
139
2.0
139
97
0
517
39
6
15
38
1.72
24432599--24432699
38
2.7
38
90
0
166
17
18
26
36
1.94
24433381--24433423
17
2.5
17
100
0
86
23
32
27
16
1.96
24437375--24437461
44
2.0
44
97
0
165
26
13
11
48
1.77
24437382--24437450
22
3.1
22
64
15
61
26
11
13
49
1.75
24441068--24441546
45
10.6
45
88
3
601
47
14
15
21
1.82
24441262--24441333
24
3.1
24
66
18
62
48
15
16
19
1.81
24441241--24441354
21
5.1
21
66
18
70
49
13
16
21
1.79
24444279--24444325
21
2.2
22
81
11
62
61
4
0
34
1.15
24444974--24445063
27
3.4
27
78
9
105
25
18
17
37
1.93
24444985--24445079
27
3.6
25
78
8
84
24
18
13
43
1.87
24445015--24445092
27
3.0
27
79
3
79
29
21
11
37
1.89
24447918--24448149
119
1.9
119
98
0
446
19
17
22
39
1.92
24448895--24449015
60
2.0
60
100
0
242
42
6
4
45
1.51
24450367--24450415
18
2.7
18
90
3
71
57
2
0
40
1.10
24450370--24450423
10
5.7
10
76
12
51
62
3
0
33
1.12
24450370--24450422
19
2.8
19
88
2
72
62
3
0
33
1.13
24450370--24450421
18
2.8
18
85
5
68
61
3
0
34
1.14
24450388--24450423
10
3.7
10
88
7
56
66
5
0
27
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24459260--24459301
20
2.1
20
82
8
50
52
0
0
47
1.00
24466919--24466951
15
2.1
16
88
5
50
60
3
3
33
1.27
24471225--24471262
20
1.9
19
89
5
58
76
5
13
5
1.13
24472187--24472295
38
2.8
39
76
6
105
22
21
25
30
1.99
24476977--24477025
20
2.6
18
75
12
53
46
14
4
34
1.63
24476977--24477029
19
2.7
21
75
18
60
43
15
3
37
1.64
24481540--24481591
23
2.3
23
89
0
77
38
1
9
50
1.46
24494610--24495420
70
11.6
70
78
1
629
29
26
18
25
1.98
24494610--24495430
210
3.9
208
76
4
716
29
26
18
25
1.98
24495322--24495461
70
2.0
70
87
1
183
35
26
14
24
1.93
24495453--24495625
70
2.5
70
83
0
229
27
25
19
27
1.98
24509494--24509540
24
2.0
24
83
8
60
27
36
17
19
1.93
24513158--24513197
19
2.1
19
85
0
53
27
0
12
60
1.33
24514345--24514426
26
3.3
26
69
10
89
25
7
13
53
1.65
24514244--24514501
49
4.9
51
88
6
310
23
8
15
53
1.68
24515875--24515916
11
3.5
12
81
9
50
38
7
21
33
1.81
24519253--24519281
13
2.1
14
93
6
51
10
6
13
68
1.37
24522175--24522314
50
2.8
51
82
3
167
30
28
17
22
1.97
24522296--24522348
26
2.0
26
100
0
106
30
30
11
28
1.91
24527756--24528001
98
2.4
102
85
5
320
21
30
21
26
1.98
24527707--24528001
50
5.8
51
82
6
298
21
29
21
27
1.99
24534579--24534648
34
2.0
36
86
8
99
7
24
8
60
1.51
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24535301--24535673
27
13.9
27
85
4
461
43
17
17
20
1.88
24535868--24535941
26
2.8
26
89
0
112
13
18
24
43
1.86
24536059--24536143
28
3.1
28
93
1
136
21
22
27
29
1.99
24536059--24536171
28
3.8
31
78
16
96
22
22
27
28
1.99
24536448--24536519
36
2.0
36
88
0
108
48
9
6
34
1.63
24540747--24540836
37
2.4
36
80
12
101
73
3
17
5
1.17
24540806--24540835
6
5.2
6
96
4
53
86
0
13
0
0.57
24545803--24545846
20
2.4
19
82
14
56
72
2
11
13
1.21
24556388--24556450
7
9.0
7
84
11
85
69
0
14
15
1.18
24558210--24558734
132
4.0
132
90
1
783
28
17
24
29
1.97
24558859--24559025
50
3.3
50
75
0
172
29
23
21
24
1.99
24558880--24559035
50
3.1
50
77
0
177
32
22
20
25
1.98
24562005--24562178
55
3.3
53
85
8
221
26
8
12
52
1.66
24562995--24563030
18
1.9
19
88
5
56
36
16
2
44
1.63
24568113--24568305
50
3.7
51
80
6
176
26
19
29
24
1.98
24568161--24568354
50
3.9
49
77
6
167
27
21
28
22
1.99
24568558--24568605
20
2.5
20
77
16
55
58
6
22
12
1.57
24572295--24572359
18
3.6
18
95
0
121
43
0
3
53
1.16
24580802--24580850
24
2.0
24
96
0
89
38
22
4
34
1.73
24581956--24582150
50
3.9
50
79
2
196
23
28
20
28
1.99

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75

The End!