Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168026.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_28, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15507587

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   

This is table  79  of  91  ( 10856 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13305188--13305267
42
1.9
42
84
5
108
52
0
0
47
1.00
13305184--13305278
42
2.2
43
78
14
99
54
0
0
45
0.99
13305680--13305704
11
2.3
11
100
0
50
28
8
8
56
1.57
13306425--13306461
8
4.3
9
83
13
51
70
0
0
29
0.88
13306425--13306457
17
2.0
17
94
5
59
72
0
0
27
0.85
13321001--13321063
23
2.7
24
72
20
62
38
0
0
61
0.96
13321061--13321101
20
2.1
19
95
4
73
70
0
0
29
0.87
13321129--13321174
18
2.5
19
82
7
58
47
8
0
43
1.34
13322111--13322150
12
3.6
11
83
9
55
27
0
2
70
1.01
13324300--13324346
23
2.0
23
87
0
67
40
10
8
40
1.70
13325238--13325314
27
3.0
27
73
9
79
41
1
0
57
1.07
13325893--13325934
3
14.0
3
100
0
84
33
0
0
66
0.92
13327489--13327566
23
3.6
22
70
16
56
42
1
1
55
1.16
13328925--13328963
19
2.1
19
85
0
51
33
0
2
64
1.08
13329553--13329592
14
2.8
14
88
3
62
35
0
7
57
1.27
13329579--13329620
12
3.7
12
78
9
52
35
0
2
61
1.09
13352240--13352265
2
13.0
2
100
0
52
50
0
50
0
1.00
13353546--13353597
16
3.4
16
74
12
56
65
1
0
32
1.04
13354170--13354236
30
2.2
31
84
12
86
55
2
1
40
1.24
13355490--13355569
38
2.1
38
83
0
97
20
18
5
56
1.60
13362248--13362325
39
2.0
39
94
0
138
34
16
14
34
1.89
13367572--13367617
4
10.5
4
86
13
56
50
2
0
47
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13367574--13367617
9
4.9
9
83
10
54
47
2
0
50
1.13
13367572--13367617
13
3.5
13
87
3
65
50
2
0
47
1.13
13367572--13367618
18
2.6
18
90
6
69
51
2
0
46
1.13
13367884--13367920
8
4.6
8
86
0
56
43
0
0
56
0.99
13367910--13367961
21
2.5
21
90
6
79
51
1
0
46
1.12
13368024--13368084
26
2.4
25
81
13
70
62
3
0
34
1.12
13376158--13376444
129
2.3
124
79
7
276
39
6
10
42
1.67
13376993--13377118
52
2.5
50
81
12
141
45
1
13
39
1.53
13384758--13384789
2
16.0
2
93
0
55
50
0
3
46
1.17
13385124--13385196
13
6.1
12
73
16
53
49
2
1
46
1.24
13388145--13388192
25
1.9
25
83
8
62
52
4
0
43
1.20
13388468--13388507
18
2.2
18
95
4
71
50
0
0
50
1.00
13388497--13388541
8
5.8
8
86
2
56
64
2
0
33
1.06
13388497--13388544
24
2.0
23
88
4
69
62
2
0
35
1.07
13391411--13391461
18
2.7
19
82
14
61
52
0
0
47
1.00
13391411--13391461
19
2.7
19
85
14
70
52
0
0
47
1.00
13391450--13391498
8
6.1
8
82
0
53
63
2
0
34
1.06
13391452--13391499
16
3.0
16
87
0
60
64
2
0
33
1.05
13391477--13391504
12
2.3
12
100
0
56
67
0
0
32
0.91
13392986--13393051
22
3.0
22
84
6
80
54
1
0
43
1.09
13392986--13393115
19
6.8
18
71
16
91
56
1
0
42
1.09
13392997--13393094
8
12.5
8
67
23
57
55
2
0
42
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13393025--13393104
35
2.3
35
87
6
117
58
2
0
38
1.11
13393129--13393167
19
2.1
19
85
9
53
48
2
0
48
1.15
13393189--13393239
16
3.6
16
68
29
51
49
3
0
47
1.20
13393187--13393252
26
2.6
25
80
7
87
46
3
0
50
1.16
13399260--13399314
23
2.3
24
93
3
94
27
9
3
60
1.44
13401135--13401167
16
2.0
17
94
5
59
18
0
0
81
0.68
13412687--13412715
3
9.7
3
100
0
58
31
0
68
0
0.89
13415619--13415653
18
2.0
17
88
5
52
54
0
0
45
0.99
13415619--13415661
18
2.4
17
81
14
50
53
0
2
44
1.13
13416088--13416125
11
3.5
11
82
10
51
44
5
0
50
1.24
13416709--13416742
14
2.5
14
85
4
52
58
0
0
41
0.98
13418118--13418166
3
16.0
3
91
4
80
65
2
0
32
1.04
13419346--13419400
19
2.8
19
80
2
65
67
1
1
29
1.11
13419705--13419749
14
3.1
15
76
20
51
55
17
0
26
1.42
13419790--13419948
14
11.1
14
64
13
65
49
29
0
20
1.53
13419734--13420025
28
10.3
29
79
8
264
47
31
1
19
1.56
13419734--13420025
86
3.4
83
82
6
327
47
31
1
19
1.56
13420011--13420083
28
2.6
27
76
10
74
46
28
5
19
1.72
13424650--13424719
28
2.5
28
88
2
95
25
21
18
34
1.96
13424808--13424862
15
3.5
17
76
18
57
83
3
0
12
0.77
13424808--13424859
6
8.5
6
84
14
54
82
3
0
13
0.80
13424810--13424861
26
2.0
26
84
3
68
82
3
0
13
0.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13426172--13426220
21
2.4
21
86
3
64
67
4
0
28
1.09
13427335--13427382
22
2.2
21
85
3
60
52
0
10
37
1.36
13427471--13427580
22
5.0
22
70
10
73
50
3
8
37
1.50
13427455--13427574
43
2.8
44
77
8
120
51
3
7
37
1.47
13427498--13427623
22
5.7
23
74
11
79
50
3
10
35
1.55
13427501--13427622
44
2.8
44
80
6
115
50
3
10
35
1.53
13427611--13427662
22
2.4
22
87
6
70
51
7
9
30
1.62
13427589--13427724
66
2.1
66
80
2
148
47
7
12
32
1.69
13427624--13427724
22
4.6
22
78
2
87
45
6
13
33
1.71
13427775--13427845
22
3.2
22
78
5
63
49
5
4
40
1.46
13427813--13427889
22
3.5
22
80
0
64
48
12
5
33
1.64
13428375--13428764
44
8.9
43
72
10
188
47
7
10
34
1.65
13428250--13428730
22
21.9
21
67
12
150
47
6
10
35
1.64
13428819--13429036
22
10.0
22
70
11
90
51
7
6
33
1.58
13428922--13429036
11
10.5
11
71
12
67
50
5
6
38
1.50
13428919--13429052
66
2.0
66
84
2
171
49
5
6
38
1.52
13428900--13429052
22
7.0
22
78
3
137
49
5
7
37
1.53
13429574--13429755
21
8.5
21
69
16
81
46
9
8
35
1.67
13429705--13429771
21
3.2
21
80
0
53
43
13
8
34
1.75
13433631--13433705
37
2.1
36
82
7
89
37
2
4
56
1.32
13437205--13437272
15
4.6
15
77
12
61
33
2
1
61
1.20
13437204--13437274
30
2.4
28
72
19
72
35
2
2
59
1.27
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13437421--13437451
15
2.1
15
93
0
53
19
3
0
77
0.90
13440266--13440290
12
2.1
12
100
0
50
16
0
8
76
1.02
13443712--13443744
13
2.8
12
90
9
50
90
0
9
0
0.44
13443712--13443746
18
2.0
17
88
5
52
88
0
11
0
0.51
13444131--13444207
39
2.0
39
86
0
109
77
0
16
5
0.94
13444132--13444205
28
2.5
29
84
10
96
78
0
16
5
0.93
13445392--13445980
42
14.1
41
87
7
805
24
18
22
34
1.96
13445987--13446049
1
63.0
1
74
0
54
87
11
0
1
0.62
13445986--13446038
18
2.8
19
83
13
74
84
11
0
3
0.73
13445989--13446049
18
3.4
19
78
19
69
86
11
0
1
0.63
13445987--13446049
25
2.6
24
85
7
83
87
11
0
1
0.62
13445987--13446041
12
4.5
12
86
4
83
87
10
0
1
0.63
13446137--13446175
15
2.7
15
96
4
71
84
0
10
5
0.76
13446328--13446358
15
2.1
15
93
0
53
19
3
0
77
0.90
13449211--13449235
12
2.1
12
100
0
50
16
0
8
76
1.02
13450175--13450212
11
3.5
11
79
13
51
50
0
5
44
1.24
13453786--13453858
24
3.0
24
69
18
60
50
0
2
46
1.15
13455506--13457566
513
4.0
514
97
0
3714
33
14
15
36
1.88
13463522--13463561
21
1.9
21
84
0
53
57
0
0
42
0.98
13463532--13463578
24
2.0
24
83
8
60
53
2
0
44
1.12
13463756--13463866
55
2.0
55
79
10
120
43
14
2
39
1.60
13464360--13464677
129
2.5
128
81
5
338
44
9
5
41
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13466884--13466925
14
2.7
15
82
17
50
54
0
2
42
1.13
13467534--13467566
8
4.2
8
88
3
50
63
3
0
33
1.10
13467534--13467576
16
2.9
15
86
10
61
65
2
0
32
1.06
13469082--13469148
22
3.0
22
84
2
80
53
1
0
44
1.09
13469125--13469183
19
3.3
19
74
13
70
55
5
0
38
1.22
13469219--13469306
19
5.0
18
68
19
60
45
1
1
52
1.15
13469219--13469288
18
3.8
20
71
21
62
44
1
0
54
1.09
13469285--13469350
26
2.6
26
85
4
91
46
1
3
48
1.26
13474149--13474216
19
3.5
19
81
13
75
61
0
1
36
1.05
13474149--13474201
22
2.4
22
87
3
79
60
0
0
39
0.97

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91