Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168015.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_27, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15675301

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   

This is table  18  of  93  ( 11062 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1970480--1970532
26
2.0
26
96
0
97
26
22
26
24
2.00
1972269--1972321
26
2.0
26
100
0
106
26
16
26
30
1.97
1978237--1987479
869
10.5
862
85
6
11269
25
24
24
25
2.00
1981440--1981492
26
2.0
26
100
0
106
26
20
26
26
1.99
1984078--1984130
26
2.0
26
96
0
97
30
18
22
28
1.98
1985834--1985886
26
2.0
26
96
0
97
26
18
26
28
1.98
1986717--1986769
26
2.0
26
96
0
97
28
20
24
26
1.99
1990147--1990192
12
4.1
12
78
16
53
67
4
15
13
1.38
1990142--1990197
21
2.7
21
94
0
94
73
3
12
10
1.22
1990133--1990214
8
8.8
9
79
20
89
75
2
12
9
1.13
1991231--1991402
41
4.1
41
91
2
263
23
17
24
34
1.96
1991410--1991464
12
4.7
11
82
12
58
87
9
0
3
0.66
1991416--1991470
20
2.7
21
83
5
69
85
7
1
5
0.80
1991665--1991803
4
33.8
4
68
17
63
30
1
3
64
1.19
1991739--1991802
26
2.5
26
85
7
78
32
0
3
64
1.10
1991785--1991868
43
2.0
43
81
13
102
21
3
4
70
1.22
1992740--1992782
13
3.1
14
84
15
63
13
0
2
83
0.74
1992813--1992866
13
4.1
13
79
11
65
12
5
1
79
0.98
1992813--1992907
5
19.6
5
69
21
60
15
5
2
76
1.05
1992912--1993033
61
2.1
59
84
6
158
51
6
13
28
1.65
1993158--1998674
875
6.2
878
80
9
5504
25
23
24
26
2.00
1995094--1995154
28
2.2
28
93
0
104
22
9
3
63
1.39
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1995129--1995174
21
2.2
21
100
0
92
26
8
4
60
1.44
1995101--1995203
49
2.1
49
82
8
120
27
9
6
56
1.57
1996486--1996535
26
1.9
26
91
0
82
26
18
30
26
1.98
1997375--1997427
26
2.0
26
92
0
88
28
18
26
26
1.98
1998252--1998304
26
2.0
26
100
0
106
26
20
26
26
1.99
1999104--2000051
474
2.0
479
86
3
1313
23
21
25
28
1.99
2000440--2000492
26
2.0
26
92
0
88
26
22
24
26
2.00
2001338--2001390
26
2.0
26
92
0
88
26
16
26
30
1.97
1999585--2002058
897
2.8
894
87
2
3518
25
23
24
26
2.00
2002126--2005058
845
3.4
870
85
5
3843
25
24
24
25
2.00
2006352--2006404
26
2.0
26
92
0
88
30
20
22
26
1.98
2005056--2011853
892
7.7
888
83
6
7850
26
23
24
25
2.00
2009017--2009069
26
2.0
26
96
0
97
26
18
26
28
1.98
2009869--2009921
26
2.0
26
96
0
97
26
18
26
28
1.98
2011647--2011699
26
2.0
26
92
0
88
30
20
22
26
1.98
2014122--2014174
26
2.0
26
88
0
79
26
18
26
28
1.98
2015010--2015062
26
2.0
26
92
0
88
28
16
26
28
1.97
2016868--2016946
26
3.0
26
96
0
140
27
18
25
27
1.98
2017782--2017857
26
2.9
27
86
7
113
27
17
26
28
1.97
2016777--2018716
914
2.1
911
87
2
2815
26
24
24
25
2.00
2020249--2020301
26
2.0
26
88
0
79
28
20
22
28
1.99
2021153--2021203
26
2.0
26
88
0
75
29
15
23
31
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2019532--2022354
889
3.2
890
84
5
3644
25
23
24
25
2.00
2022047--2022098
26
2.0
26
96
0
95
28
19
25
26
1.98
2022641--2022693
26
2.0
26
92
0
88
28
18
24
28
1.98
2022347--2037606
871
17.0
871
75
11
10454
25
24
24
25
2.00
2025284--2025336
26
2.0
26
96
0
97
24
20
26
28
1.99
2029053--2029105
26
2.0
26
92
0
88
28
18
26
26
1.98
2032572--2032624
26
2.0
26
92
0
88
24
18
28
28
1.98
2026906--2037606
862
12.2
859
82
7
11432
25
23
24
25
2.00
2036953--2037031
26
3.0
26
94
0
131
27
20
22
29
1.98
2037676--2037719
15
2.9
15
86
10
63
13
2
4
79
0.98
2037724--2037866
4
34.5
4
69
18
62
30
1
3
65
1.18
2037796--2037859
26
2.5
26
85
7
78
32
0
3
64
1.10
2037729--2037866
38
3.6
37
75
16
122
29
1
3
65
1.18
2037842--2037924
43
2.0
42
81
15
100
21
3
4
69
1.22
2038870--2038952
5
16.8
5
75
24
79
15
2
1
80
0.87
2038870--2038919
9
5.6
9
88
7
75
14
0
0
86
0.58
2038870--2038952
22
4.0
20
79
17
73
15
2
1
80
0.87
2038968--2039413
58
7.7
57
85
9
550
44
8
12
34
1.72
2048909--2049013
9
10.7
9
77
22
97
77
0
11
10
1.05
2048919--2048997
12
7.4
11
80
16
78
77
0
11
11
1.00
2048909--2049013
21
5.2
20
80
16
128
77
0
11
10
1.05
2050028--2050200
42
4.1
43
78
16
161
25
17
23
32
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2050207--2050254
6
8.0
6
80
17
55
85
12
0
2
0.69
2050208--2050262
19
3.0
18
87
10
76
85
9
1
3
0.79
2050208--2050256
9
5.4
9
77
18
57
87
10
0
2
0.62
2050415--2050456
15
2.7
16
85
7
59
9
7
4
78
1.08
2050531--2050577
17
2.7
17
83
9
51
34
0
2
63
1.06
2050627--2050674
25
1.9
25
84
16
64
14
10
6
68
1.37
2053864--2053916
26
2.0
26
82
7
63
28
18
22
30
1.98
2051737--2058826
870
8.1
869
84
7
8475
25
24
24
25
2.00
2059003--2059075
4
17.8
4
76
16
53
30
0
2
67
1.05
2058998--2059047
14
3.4
16
79
15
56
34
0
6
60
1.21
2059002--2059065
20
3.1
20
75
24
62
34
0
3
62
1.11
2059052--2059132
42
2.0
41
87
7
119
22
3
4
69
1.24
2059493--2059530
19
2.0
19
94
0
67
28
13
21
36
1.91
2060067--2060159
5
19.6
5
75
18
92
17
3
1
78
0.94
2060067--2060159
18
5.2
18
77
14
102
17
3
1
78
0.94
2060174--2060633
60
7.7
60
86
7
602
44
8
12
33
1.74
2070172--2070264
11
8.2
12
74
24
78
80
1
9
8
0.95
2070177--2070207
15
2.1
15
93
0
53
70
3
12
12
1.27
2070162--2070282
23
5.5
21
74
21
81
76
1
12
9
1.10
2070172--2070264
14
7.0
14
71
22
58
80
1
9
8
0.95
2070182--2070282
19
4.5
23
76
18
81
76
0
12
9
1.08
2070182--2070255
36
2.3
30
86
13
94
79
1
9
9
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2070172--2070257
32
2.5
32
88
9
118
80
1
9
9
0.97
2071283--2071455
41
4.1
41
90
2
256
23
17
23
34
1.96
2071463--2071500
14
2.8
13
88
7
58
84
10
0
5
0.77
2071462--2071520
21
3.0
21
87
7
79
81
8
1
8
0.95
2071469--2071506
14
2.7
14
87
0
58
84
7
0
7
0.79
2071682--2071714
16
2.0
17
94
5
59
6
6
3
84
0.84
2072843--2072952
5
22.6
5
74
18
81
16
4
1
77
1.02
2072843--2072957
24
4.7
24
71
19
71
16
5
1
76
1.05
2072842--2072956
29
4.0
29
79
9
103
15
6
1
76
1.06
2072848--2072957
53
2.1
53
81
6
125
16
5
1
76
1.06
2072957--2073427
59
7.9
58
86
5
599
45
8
13
32
1.74
2072966--2073427
119
3.9
118
88
5
639
44
9
13
32
1.75
2074185--2083079
904
9.9
887
77
10
7821
25
24
24
25
2.00
2083307--2083344
19
2.0
19
89
0
58
28
10
21
39
1.86
2083880--2083978
5
19.6
5
75
19
82
16
4
2
77
1.01
2083880--2083979
27
3.5
31
78
13
106
16
5
2
77
1.04
2083873--2083978
35
3.0
34
79
8
97
16
5
1
76
1.06
2083880--2083978
14
7.6
13
71
22
57
16
4
2
77
1.01
2083983--2084513
119
4.5
118
87
6
673
44
7
14
33
1.74
2083994--2084513
59
8.7
59
84
7
642
43
8
14
33
1.75
2083993--2084511
180
2.9
175
90
5
754
44
7
14
33
1.74
2087240--2087644
59
6.7
59
83
6
501
32
13
9
44
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2087240--2087643
119
3.4
118
90
5
598
32
13
9
44
1.76
2087654--2087749
8
11.6
8
70
15
54
79
1
4
15
0.94
2087659--2087752
5
19.4
5
72
22
76
79
1
3
15
0.91
2087654--2087749
9
10.6
9
71
20
67
79
1
4
15
0.94
2089090--2089142
26
2.0
26
92
0
88
26
26
20
26
1.99
2089987--2090039
26
2.0
26
88
0
79
30
24
16
28
1.97
2087994--2096343
900
9.4
886
83
5
9591
25
24
23
26
2.00
2092796--2092856
32
1.9
32
100
0
122
13
13
50
22
1.75
2094410--2094462
26
2.0
26
85
0
70
28
20
20
30
1.98
2091747--2096342
904
5.1
896
84
4
5655
25
24
23
26
2.00

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93