Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168015.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_27, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15675301

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   

This is table  93  of  93  ( 11062 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15660758--15661039
77
3.6
78
81
5
286
25
10
21
41
1.86
15660724--15661065
116
3.0
115
81
5
381
25
11
21
41
1.87
15661241--15661278
3
12.7
3
100
0
76
31
0
0
68
0.90
15661722--15661800
20
4.0
20
78
6
88
27
18
12
40
1.87
15662144--15662210
12
5.2
12
75
18
64
25
0
4
70
1.06
15662767--15662812
23
2.0
22
83
4
56
69
0
2
28
1.00
15662885--15662984
51
2.0
51
86
2
139
40
12
13
35
1.81
15663690--15664529
180
4.7
178
74
9
577
40
8
8
43
1.65
15664747--15664783
18
2.1
18
90
10
58
45
8
0
45
1.32
15664556--15667674
181
17.3
179
76
6
2248
40
7
9
42
1.68
15664566--15667674
360
8.6
363
75
6
2275
40
7
9
42
1.67
15667072--15667452
179
2.1
180
79
4
412
38
8
9
43
1.68
15667672--15669263
178
9.0
175
74
9
1077
39
7
10
42
1.69
15667763--15669255
533
2.8
533
84
3
1803
38
7
10
42
1.69
15669496--15671627
361
6.0
350
75
9
1420
40
9
9
41
1.69
15670397--15670731
166
2.0
162
82
3
402
38
9
9
41
1.71
15669641--15671634
522
3.7
522
77
8
1653
40
9
9
41
1.69
15670563--15671655
181
6.1
180
77
6
955
41
8
9
40
1.68
15672233--15675293
181
17.1
179
70
13
898
41
10
9
39
1.71
15673335--15673624
161
1.8
161
82
3
377
43
10
7
38
1.67
15673490--15675296
181
10.0
180
75
7
1259
41
10
9
38
1.72
15673734--15675140
716
2.0
717
81
5
1686
42
10
8
38
1.71

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93

The End!