Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167938.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_20, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19866354

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   

This is table  65  of  100  ( 11964 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15475910--15475945
16
2.3
16
95
4
65
80
0
0
19
0.71
15476868--15477083
7
31.0
7
70
19
93
66
2
3
28
1.20
15476859--15476914
24
2.2
26
90
6
89
60
0
3
35
1.14
15476897--15477011
44
2.5
45
78
13
119
64
2
3
29
1.23
15476878--15477071
13
13.5
14
67
22
66
66
2
3
28
1.18
15477018--15477050
17
1.9
17
88
11
50
72
0
3
24
0.98
15476941--15477084
11
13.9
10
69
22
61
70
1
2
25
1.09
15476943--15477066
31
3.8
31
69
16
81
70
0
2
26
1.05
15477160--15477254
45
2.1
45
84
0
118
22
34
21
22
1.97
15477646--15477671
13
2.0
13
100
0
52
15
23
23
38
1.92
15487248--15487369
44
2.7
45
74
2
147
20
30
25
23
1.99
15490515--15490609
44
2.1
45
88
1
138
18
34
21
25
1.96
15491533--15491631
45
2.2
45
82
7
112
24
30
23
22
1.99
15496209--15496334
45
2.8
45
69
4
103
20
27
24
26
1.99
15504547--15504611
21
3.1
21
67
20
64
26
15
18
40
1.90
15507836--15507886
22
2.3
22
79
0
66
27
3
1
66
1.20
15507842--15507884
4
10.2
4
80
9
50
25
4
2
67
1.22
15513539--15513582
22
2.0
22
95
0
79
31
11
13
43
1.80
15513806--15513871
25
2.6
25
85
7
80
18
25
18
37
1.93
15517296--15517339
22
2.0
22
90
0
70
43
11
11
34
1.77
15517308--15517357
20
2.3
21
83
10
57
50
14
8
28
1.70
15521268--15521311
22
2.0
22
95
0
79
43
13
11
31
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15532787--15535211
481
5.1
487
81
7
2724
39
17
11
31
1.86
15535233--15535283
19
2.5
20
87
9
68
43
0
0
56
0.99
15535646--15535678
14
2.4
14
94
0
57
51
0
0
48
1.00
15535625--15535674
26
1.9
26
84
8
66
50
0
2
48
1.12
15535913--15535953
20
2.1
20
86
4
57
39
2
0
58
1.11
15536278--15536677
181
2.2
180
79
7
418
43
4
8
43
1.56
15536856--15536900
20
2.4
19
82
17
58
51
0
0
48
1.00
15536874--15536903
14
2.1
15
93
6
53
50
0
0
50
1.00
15537924--15537980
16
3.5
15
75
11
51
47
1
0
50
1.11
15538157--15538207
21
2.4
22
80
9
61
43
3
1
50
1.31
15538157--15538213
21
2.7
20
76
10
51
43
5
1
49
1.35
15538389--15538485
34
2.8
32
81
13
86
41
5
2
51
1.36
15538657--15538710
26
2.0
27
89
3
83
44
1
0
53
1.11
15538768--15538834
34
2.0
34
88
5
100
40
2
5
50
1.42
15539343--15539439
9
10.8
9
65
19
51
45
1
2
51
1.19
15539788--15539827
10
3.9
11
87
12
50
52
2
0
45
1.14
15539795--15539837
14
3.1
14
83
10
52
55
0
0
44
0.99
15539814--15539846
17
1.9
17
88
11
50
60
0
0
39
0.97
15540383--15540425
18
2.4
19
80
11
54
41
4
2
51
1.35
15542220--15542272
26
2.0
26
96
0
97
24
20
28
26
1.99
15543013--15543117
38
2.7
37
79
16
99
77
1
0
20
0.93
15543054--15543115
33
1.9
33
90
3
99
80
1
0
17
0.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15542843--15543126
9
28.5
10
68
16
69
72
4
3
20
1.15
15542948--15543107
70
2.3
69
77
13
159
73
3
2
21
1.09
15543059--15543120
6
11.2
6
77
20
64
82
1
0
16
0.75
15543059--15543142
28
3.0
28
79
13
84
80
2
3
13
0.93
15543054--15543140
39
2.3
39
82
6
97
81
1
3
13
0.88
15543310--15543476
40
4.2
39
91
6
248
35
23
17
22
1.96
15544460--15544556
8
11.6
8
83
14
108
11
12
0
76
1.03
15544474--15544559
19
4.9
17
86
13
122
12
11
0
75
1.05
15544460--15544556
46
2.1
45
83
11
117
11
12
0
76
1.03
15544474--15544559
8
9.8
9
87
12
110
12
11
0
75
1.05
15544474--15544556
27
3.2
26
85
14
118
12
10
0
77
1.00
15552921--15553137
57
3.8
59
86
6
311
34
14
7
42
1.75
15552921--15553127
116
1.8
114
91
3
335
35
15
8
40
1.77
15554168--15554235
22
3.1
21
78
19
68
60
5
7
26
1.46
15554357--15554411
6
9.2
6
84
7
67
78
3
0
18
0.90
15554385--15554439
17
3.3
17
84
2
58
76
1
12
9
1.10
15555422--15555474
26
2.0
26
88
0
79
26
18
26
28
1.98
15555267--15555815
184
3.0
184
82
2
595
24
28
26
20
1.99
15555606--15555658
26
2.0
26
89
7
81
30
20
22
26
1.98
15555631--15556075
159
2.8
156
73
10
395
23
30
27
18
1.98
15556828--15556880
26
2.0
26
89
7
81
30
18
22
28
1.98
15556853--15557407
159
3.5
158
74
5
485
24
27
27
20
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15557852--15558271
183
2.3
183
83
4
517
24
29
26
19
1.98
15558388--15558439
25
2.0
26
92
3
88
30
23
23
23
1.99
15558413--15558913
158
3.2
156
74
6
445
24
30
25
19
1.98
15558887--15558939
26
2.0
26
92
0
88
26
20
26
26
1.99
15559769--15559821
26
2.0
26
88
0
79
24
16
28
30
1.97
15560130--15560485
171
2.1
171
82
3
423
22
30
25
21
1.98
15560459--15560511
26
2.0
26
89
7
81
30
15
22
32
1.94
15560485--15560986
158
3.2
157
75
5
472
24
28
25
20
1.99
15560960--15561012
26
2.0
26
92
0
88
30
20
22
26
1.98
15567493--15567545
26
2.0
26
89
7
81
30
15
22
32
1.94
15567519--15568019
159
3.2
159
74
10
400
24
29
25
19
1.99
15567994--15568045
26
2.0
25
88
3
77
26
19
26
26
1.99
15568374--15568426
26
2.0
26
92
0
88
32
20
22
24
1.98
15568399--15568768
158
2.3
158
78
4
395
24
28
26
20
1.99
15568875--15568931
26
2.2
26
83
0
78
33
17
19
29
1.95
15570104--15570156
26
2.0
26
92
0
88
26
20
26
26
1.99
15570825--15570877
26
2.0
26
92
7
90
28
20
24
26
1.99
15571167--15571219
26
2.0
26
82
13
65
22
16
28
32
1.96
15571504--15571556
26
2.0
26
92
0
88
24
20
26
28
1.99
15572908--15573005
26
3.8
26
97
2
180
30
19
23
26
1.98
15573462--15573514
26
2.0
26
92
0
88
24
18
28
28
1.98
15573698--15574198
159
3.2
158
75
6
422
26
29
24
20
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15574172--15574224
26
2.0
26
92
0
88
22
20
28
28
1.99
15575409--15575461
26
2.0
26
89
7
81
28
20
22
28
1.99
15575517--15575575
30
2.0
30
100
0
118
10
30
25
33
1.89
15575590--15575642
26
2.0
26
85
7
72
30
18
22
28
1.98
15580823--15580917
8
10.8
8
79
14
82
80
0
7
12
0.91
15580824--15580856
10
3.4
10
95
4
59
90
0
0
9
0.44
15580823--15580911
17
4.9
17
80
15
99
79
0
6
13
0.91
15580824--15580911
9
9.7
9
83
16
101
80
0
6
12
0.89
15580864--15580925
8
7.6
8
85
8
81
79
0
11
9
0.95
15581920--15582093
42
4.1
42
88
2
217
22
18
24
34
1.96
15582300--15582355
6
9.2
6
84
7
69
19
1
1
76
0.96
15582490--15582534
22
2.2
21
84
11
58
24
4
4
66
1.29
15583165--15583217
26
2.0
26
96
0
97
26
28
20
24
1.99
15583191--15583695
159
3.2
160
76
6
445
19
26
30
23
1.98
15584376--15584428
26
2.0
26
89
7
81
32
18
22
26
1.97
15585615--15586055
159
2.8
160
75
7
434
23
30
27
19
1.98
15586184--15586209
13
2.0
13
100
0
52
23
23
46
7
1.78
15584860--15587220
710
3.3
705
84
3
2798
23
27
26
21
1.99
15586325--15586743
159
2.6
158
75
5
423
25
28
26
19
1.99
15586803--15586855
26
2.0
26
92
7
90
26
20
26
26
1.99
15587011--15587063
26
2.0
26
100
0
106
30
20
22
26
1.98
15588256--15588308
26
2.0
26
85
0
70
26
16
26
30
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15588757--15588809
26
2.0
26
85
7
72
28
15
24
32
1.95
15588967--15589019
26
2.0
26
92
7
90
28
20
24
26
1.99
15589470--15589521
26
2.0
26
88
7
79
28
17
26
26
1.97
15589446--15589803
197
1.8
196
84
3
495
25
27
25
20
1.99
15590482--15591101
330
1.9
329
81
2
760
24
30
26
19
1.98
15591695--15591747
26
2.0
26
92
0
88
24
18
28
28
1.98
15592706--15592758
26
2.0
26
92
0
88
30
20
20
28
1.98
15593656--15593708
26
2.0
26
92
0
88
26
20
26
26
1.99
15594367--15594419
26
2.0
26
89
7
81
28
20
22
28
1.99
15594392--15594749
158
2.3
158
78
5
373
24
29
26
19
1.98

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100