Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167960.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_22, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19587844

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   

This is table  41  of  105  ( 12570 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7796595--7796627
5
6.8
5
93
6
59
0
0
42
57
0.98
7806193--7806222
12
2.6
12
94
5
53
53
16
0
30
1.44
7807584--7807628
22
2.1
22
83
4
56
62
4
2
31
1.27
7808318--7808373
21
2.6
22
83
8
62
35
1
0
62
1.06
7809522--7809562
21
1.9
22
85
5
57
58
12
2
26
1.46
7810390--7810467
41
1.9
41
86
0
111
34
20
5
39
1.75
7810369--7810497
41
3.4
35
73
15
105
31
22
5
40
1.77
7820899--7820923
6
4.2
6
100
0
50
48
16
0
36
1.46
7829241--7829305
18
3.8
18
79
20
70
30
0
0
69
0.89
7829251--7829305
12
5.0
11
82
12
69
30
0
0
69
0.89
7829238--7829295
6
10.2
6
78
17
70
32
0
0
67
0.91
7829321--7829461
61
2.3
59
83
11
187
51
2
7
38
1.46
7829370--7829410
16
2.4
17
84
15
50
43
2
2
51
1.28
7829435--7829477
17
2.6
17
92
3
70
58
6
0
34
1.25
7829435--7829479
16
2.8
16
87
12
65
57
6
0
35
1.25
7829583--7829617
18
1.9
18
88
0
52
5
5
2
85
0.81
7839301--7839348
11
4.3
11
84
10
62
79
0
10
10
0.95
7839301--7839355
22
2.7
19
79
20
58
80
0
9
10
0.92
7840359--7840843
44
11.2
44
77
9
365
23
12
18
44
1.84
7840411--7840840
86
5.0
86
78
8
406
23
13
18
44
1.84
7841036--7841082
6
8.0
6
95
2
69
17
10
0
72
1.12
7841220--7841256
17
2.2
17
95
4
67
67
5
0
27
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7841216--7841258
16
2.8
16
86
13
63
60
6
0
32
1.23
7841295--7841332
17
2.3
17
95
4
69
65
0
0
34
0.93
7841368--7841403
17
2.2
17
90
5
56
66
2
0
30
1.06
7841164--7841520
75
4.8
75
89
2
488
51
4
6
36
1.49
7841437--7841478
17
2.5
17
88
3
59
57
4
0
38
1.20
7842159--7842257
50
2.0
50
92
4
164
45
13
7
34
1.70
7852290--7852326
13
2.8
13
87
0
56
27
18
27
27
1.98
7856622--7856652
16
1.9
16
100
0
62
22
19
19
38
1.93
7859286--7859369
43
2.0
43
92
0
141
22
11
23
41
1.87
7861332--7861466
40
3.5
39
76
15
104
52
2
0
44
1.16
7870153--7870196
18
2.5
17
82
13
54
59
0
38
2
1.10
7870995--7871030
18
1.9
19
88
5
56
2
11
22
63
1.39
7871415--7871456
22
1.9
22
90
0
66
42
2
9
45
1.49
7871440--7871464
8
3.1
8
100
0
50
48
0
12
40
1.40
7900573--7900946
197
1.9
197
87
1
543
44
11
7
36
1.68
7908775--7908808
15
2.2
16
89
5
52
20
0
8
70
1.13
7909468--7909640
22
7.9
22
74
7
120
36
4
6
52
1.49
7909470--7909619
11
13.6
11
68
7
81
36
4
4
54
1.42
7909468--7909653
44
4.2
44
74
6
137
37
5
6
50
1.52
7909470--7909640
66
2.6
66
81
6
177
36
4
6
52
1.48
7909540--7909653
22
5.2
21
74
6
57
40
6
7
46
1.56
7909578--7909727
74
2.0
74
79
5
160
39
10
6
44
1.62
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7909678--7909727
22
2.3
22
100
0
100
44
14
0
42
1.44
7909877--7910110
22
10.6
22
68
11
77
38
8
7
46
1.62
7909958--7910082
67
1.9
66
80
5
144
40
8
4
46
1.54
7910027--7910110
44
1.9
43
83
7
107
36
10
4
47
1.59
7910035--7910089
11
5.0
11
75
0
56
36
7
5
50
1.53
7910347--7910407
22
2.8
22
80
9
70
37
3
9
49
1.52
7910391--7910433
22
2.0
22
85
0
59
41
11
6
39
1.68
7910464--7910515
22
2.4
22
83
0
68
34
9
9
46
1.69
7910499--7910539
19
2.2
19
90
0
64
41
17
2
39
1.62
7910606--7910632
11
2.5
11
100
0
54
44
14
0
40
1.46
7910671--7910840
22
7.8
23
72
11
67
37
7
5
49
1.56
7910691--7910840
65
2.3
66
80
1
167
36
8
6
49
1.57
7910784--7910872
22
4.0
22
82
11
101
40
10
1
48
1.44
7910865--7910990
22
5.7
22
75
0
81
34
8
7
49
1.61
7910673--7910935
44
6.1
43
71
15
136
38
7
4
49
1.53
7910883--7910989
44
2.4
44
81
3
108
32
8
8
50
1.63
7910992--7911044
22
2.4
21
76
17
54
35
3
7
52
1.48
7911009--7911095
43
2.0
43
84
4
113
39
5
6
48
1.54
7911073--7911165
22
4.2
22
72
15
68
36
12
4
46
1.62
7911082--7911206
44
2.9
44
77
11
116
36
13
5
44
1.68
7911128--7911206
21
3.7
21
84
5
79
35
12
6
45
1.68
7913444--7913492
17
3.1
16
80
11
57
44
2
0
53
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7915946--7916008
19
3.2
19
73
18
56
61
1
0
36
1.05
7917206--7917262
23
2.3
26
88
8
84
77
0
22
0
0.77
7917206--7917262
12
4.7
12
79
12
62
77
0
22
0
0.77
7918534--7918576
19
2.2
19
83
4
50
48
4
11
34
1.60
7919617--7919684
6
11.3
6
81
13
52
61
2
1
33
1.20
7920702--7920837
65
2.0
68
80
6
154
42
10
22
24
1.84
7920963--7921225
64
4.2
64
78
4
225
42
11
22
23
1.85
7920958--7921232
127
2.2
124
81
4
302
42
10
22
24
1.86
7921129--7921225
30
3.2
30
76
5
97
43
14
20
21
1.87
7921021--7921265
124
2.0
125
82
5
298
44
11
20
22
1.84
7921426--7921469
18
2.4
18
84
0
52
54
9
6
29
1.58
7921461--7921501
18
2.3
17
84
12
55
34
19
19
26
1.96
7925230--7925742
58
8.9
58
86
7
701
35
11
6
47
1.64
7925788--7925846
6
9.7
6
78
10
66
79
3
3
13
0.98
7926274--7926314
11
3.7
11
90
0
64
26
17
26
29
1.97
7927135--7927397
41
6.3
41
86
2
319
35
22
17
24
1.95
7927382--7927413
16
2.0
16
93
0
55
28
25
15
31
1.96
7927341--7927454
57
2.0
57
91
0
183
34
22
16
26
1.95
7927398--7927570
41
4.2
41
90
1
274
36
23
15
24
1.93
7927299--7927485
98
1.9
99
88
1
286
34
23
16
25
1.95
7927257--7927537
140
2.0
141
88
2
422
35
23
16
24
1.95
7927406--7927569
83
2.0
82
92
1
274
39
23
14
23
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7928591--7928665
8
9.8
8
81
15
88
10
12
0
77
1.00
7928589--7928665
15
5.1
15
79
16
79
10
12
0
76
1.02
7928591--7928665
24
3.2
24
90
5
111
10
12
0
77
1.00
7933925--7933962
20
1.9
20
89
10
60
21
13
5
60
1.52
7938287--7938377
25
3.7
24
77
11
76
50
9
7
31
1.64
7938323--7938377
25
2.2
25
87
9
78
56
12
5
25
1.58
7938323--7938361
11
3.1
14
75
24
50
58
12
5
23
1.54
7938411--7938466
24
2.4
25
85
14
75
60
14
7
17
1.55
7938543--7938590
17
2.9
17
82
11
55
79
10
0
10
0.95
7938569--7938595
6
4.5
6
100
0
54
85
0
0
14
0.61
7939851--7939949
43
2.3
43
86
8
132
28
13
19
39
1.89
7941635--7941693
11
5.4
11
76
9
50
5
15
1
77
1.01
7941633--7941675
22
2.0
22
86
9
61
4
16
0
79
0.90
7941641--7941681
16
2.6
16
84
0
55
4
17
0
78
0.93
7941637--7941694
27
2.1
27
84
6
73
5
17
1
75
1.06
7943334--7943685
175
2.0
175
98
0
686
31
17
13
37
1.88
7948447--7948499
19
2.9
19
75
8
56
54
9
7
28
1.59
7948544--7948702
86
1.9
86
81
6
198
56
11
5
27
1.55
7948681--7948723
14
3.3
13
81
15
54
62
11
6
18
1.50
7948795--7948887
11
8.2
11
78
13
73
77
8
1
12
1.04
7948795--7948875
16
4.9
16
79
18
85
77
9
0
12
0.98
7948830--7948887
6
9.8
6
74
10
57
77
6
1
13
1.05
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7950507--7951029
263
2.0
263
90
0
823
42
12
17
28
1.85
7954578--7954847
48
5.5
48
80
9
271
28
15
10
44
1.80
7954581--7954860
99
2.9
94
80
11
289
29
15
10
45
1.79
7954819--7954938
48
2.5
48
81
0
150
28
15
10
46
1.77
7957748--7957804
16
3.5
16
80
4
60
78
1
17
1
0.91
7957760--7957804
8
5.5
8
81
5
54
82
0
17
0
0.68
7957764--7957803
14
2.9
13
85
7
53
85
0
15
0
0.61
7957760--7957803
22
2.1
20
91
8
70
84
0
15
0
0.63
7957760--7957803
21
2.1
21
87
8
63
84
0
15
0
0.63
7958997--7959134
18
7.7
17
79
13
120
47
13
10
28
1.74

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105