Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: NW_019167882.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_15, whole genome shotgun sequence Parameters: 2 7 7 80 10 50 1000 Length: 22478863

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   

This is table  102  of  106  ( 12717 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21721165--21721260
45
2.1
47
86
11
137
55
2
1
41
1.18
21721165--21721275
44
2.5
44
84
10
120
54
2
1
40
1.25
21721642--21721865
77
2.9
75
82
7
263
35
9
4
50
1.54
21722932--21722975
23
1.9
24
86
9
65
43
6
4
45
1.51
21723695--21723754
14
4.5
14
72
19
56
61
1
5
31
1.27
21724562--21724594
16
2.1
16
94
0
57
51
3
3
42
1.32
21724697--21724742
19
2.5
18
82
3
56
41
0
0
58
0.98
21724758--21724828
25
2.8
24
77
8
70
52
1
1
45
1.18
21728086--21728136
24
2.1
24
96
0
93
21
21
21
35
1.96
21734625--21734660
13
2.8
13
86
0
54
50
0
2
47
1.15
21734639--21734674
18
1.9
19
88
5
56
52
0
0
47
1.00
21734747--21734786
19
2.2
19
86
13
57
52
0
0
47
1.00
21734763--21734815
22
2.5
21
82
11
56
54
1
0
43
1.11
21734872--21734938
33
2.0
33
82
0
80
52
4
5
37
1.46
21734882--21734967
33
2.6
33
83
0
100
47
8
6
37
1.60
21738558--21738598
15
2.7
15
92
0
64
68
12
0
19
1.21
21741848--21741900
27
2.0
27
85
7
72
43
18
9
28
1.81
21742175--21742204
15
2.0
15
93
0
51
40
33
10
16
1.82
21760692--21760842
71
2.1
71
96
0
275
37
19
15
27
1.93
21764707--21764885
77
2.4
75
82
6
202
53
12
18
15
1.72
21765256--21765280
6
4.2
6
100
0
50
0
16
36
48
1.46
21773424--21773489
29
2.3
29
82
7
73
43
1
4
50
1.32
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21773585--21773660
29
2.6
29
91
0
116
48
14
0
36
1.44
21777589--21777635
20
2.4
19
79
10
51
48
10
4
36
1.57
21777958--21778232
137
2.0
137
97
0
514
32
16
13
38
1.87
21783600--21783645
24
1.9
24
90
0
74
39
19
13
28
1.89
21783624--21783798
42
4.1
42
85
0
242
48
12
12
26
1.76
21796073--21796124
25
2.1
25
89
7
79
38
5
7
48
1.56
21798195--21798231
18
2.1
18
100
0
74
45
21
10
21
1.82
21814048--21814091
22
2.0
22
95
0
79
31
11
13
43
1.80
21818282--21818331
24
2.1
24
92
7
84
22
18
8
52
1.71
21819239--21819394
77
2.0
78
98
1
305
37
17
12
32
1.88
21819513--21819554
21
2.0
21
85
4
57
23
9
30
35
1.87
21824539--21824838
13
23.8
13
66
26
114
55
2
1
41
1.20
21824562--21824626
18
3.7
18
76
14
55
52
4
1
41
1.31
21824537--21824685
49
3.0
50
76
15
132
52
2
1
43
1.23
21824601--21824741
21
6.8
20
68
20
67
56
2
0
41
1.16
21824635--21824811
32
5.7
31
71
14
114
55
1
1
41
1.17
21824661--21824853
68
3.0
64
74
13
189
55
1
1
41
1.13
21824654--21824849
36
5.8
36
70
20
122
56
1
1
41
1.13
21824872--21824929
15
3.8
14
72
18
53
46
0
0
53
1.00
21824841--21824896
18
3.2
17
78
12
60
37
1
1
58
1.19
21825506--21825562
30
1.9
30
85
0
78
43
3
15
36
1.64
21827102--21827138
15
2.5
15
90
0
56
54
0
0
45
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21828026--21828095
20
3.5
20
70
14
54
37
2
2
57
1.29
21828029--21828113
40
2.1
41
95
2
154
40
2
3
54
1.31
21828586--21828620
18
1.9
18
88
0
52
20
2
2
74
1.08
21828760--21828816
13
4.4
13
76
10
55
7
8
0
84
0.79
21832522--21832569
15
3.1
15
74
14
53
68
0
2
29
1.01
21832491--21832602
30
3.8
30
82
3
111
58
0
6
33
1.29
21832836--21832876
22
1.9
22
90
5
66
36
2
0
60
1.10
21838560--21838697
67
2.0
69
95
2
253
39
7
11
40
1.71
21840983--21841009
2
13.5
2
100
0
54
0
0
48
51
1.00
21841986--21842031
18
2.6
18
78
0
56
41
4
34
19
1.71
21842917--21842982
30
2.2
31
88
2
98
21
21
19
37
1.94
21848995--21849023
1
29.0
1
100
0
58
100
0
0
0
0.00
21854918--21855001
42
2.0
42
88
0
123
39
8
13
39
1.74
21855395--21855660
88
3.0
88
94
0
478
31
33
12
21
1.91
21855985--21856043
25
2.4
25
85
0
82
18
35
6
38
1.78
21860620--21860644
12
2.1
12
100
0
50
32
16
8
44
1.76
21865174--21865231
2
29.0
2
100
0
116
50
0
50
0
1.00
21866021--21866113
32
2.9
33
82
3
93
50
6
17
25
1.69
21866056--21866119
32
2.0
32
93
0
110
46
6
21
25
1.74
21873333--21873384
23
2.3
22
83
3
59
0
15
3
80
0.85
21879378--21879435
29
2.0
29
93
0
98
34
13
8
43
1.75
21881072--21881190
63
1.9
62
82
5
150
39
9
8
42
1.67
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21882306--21883022
363
2.0
365
86
2
1014
39
10
13
36
1.79
21885404--21885501
47
2.0
49
84
7
130
35
9
6
48
1.60
21885444--21885619
60
3.0
59
85
4
239
35
8
6
48
1.60
21885609--21885714
54
1.9
55
84
3
142
41
10
4
43
1.60
21885609--21885728
54
2.2
55
77
7
129
39
10
4
46
1.57
21885726--21885819
31
3.1
31
67
14
88
40
7
5
46
1.55
21885670--21885865
61
3.3
56
78
11
169
40
7
4
47
1.51
21885724--21885865
59
2.4
60
84
4
189
40
6
4
49
1.48
21887345--21887414
29
2.4
29
79
11
74
71
5
2
20
1.19
21887310--21887414
14
7.6
13
67
13
50
70
3
5
20
1.24
21887687--21887732
4
11.8
4
78
21
53
23
0
4
71
1.03
21888281--21888330
18
2.6
19
81
12
57
64
0
36
0
0.94
21888853--21888910
13
4.3
12
73
23
53
82
10
0
6
0.83
21899653--21899721
9
7.8
9
77
9
61
79
0
11
8
0.93
21899661--21899709
16
2.9
16
84
9
62
77
0
12
10
0.99
21900698--21901028
89
3.7
89
83
5
418
22
11
19
46
1.82
21900698--21901028
133
2.5
135
83
3
395
22
11
19
46
1.82
21900703--21901028
44
7.4
44
80
6
354
21
11
20
46
1.83
21901272--21901318
11
4.2
11
83
5
58
19
2
2
76
0.99
21901362--21901408
18
2.7
18
83
6
53
59
0
12
27
1.34
21902067--21902102
14
2.6
14
86
0
54
11
36
27
25
1.90
21902452--21902476
13
1.9
13
100
0
50
80
4
8
8
1.03
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21902465--21902503
18
2.2
18
85
0
51
82
5
2
10
0.93
21903495--21903520
2
13.0
2
100
0
52
50
0
0
50
1.00
21903771--21903801
14
2.2
14
94
0
53
61
3
0
35
1.12
21909081--21909120
3
13.3
3
87
10
55
35
0
2
62
1.09
21911768--21911802
17
2.0
18
88
5
54
65
5
0
28
1.15
21915766--21915864
51
1.9
51
100
0
198
34
25
8
32
1.85
21917470--21917500
13
2.4
13
100
0
62
48
0
22
29
1.51
21919166--21919198
9
3.7
9
88
12
50
69
0
9
21
1.15
21919159--21919212
8
6.8
8
87
8
58
74
0
9
16
1.07
21920400--21920462
23
2.9
21
75
13
56
39
6
17
36
1.75
21920425--21920525
51
2.0
51
86
3
141
33
7
14
43
1.75
21920607--21920713
42
2.5
42
81
6
117
36
7
18
37
1.79
21920576--21920773
108
1.8
107
89
1
306
34
8
19
37
1.81
21920864--21920913
17
2.9
17
84
0
64
44
6
12
38
1.66
21920939--21920998
17
3.6
17
79
4
68
38
16
11
33
1.85
21920852--21920998
33
4.4
34
68
9
104
42
14
10
33
1.79
21924434--21924474
19
2.1
19
90
4
64
53
4
14
26
1.61
21926442--21926533
14
6.4
14
71
12
62
50
26
1
22
1.56
21926472--21926535
22
3.0
22
86
2
85
48
29
0
21
1.51
21926441--21926535
29
3.3
28
81
12
97
48
28
1
22
1.57
21926463--21926535
14
5.1
14
77
6
65
47
30
0
21
1.51
21926994--21927041
18
2.7
17
84
9
60
60
6
0
33
1.22
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21928747--21928818
30
2.3
31
81
18
87
50
0
0
50
1.00
21928755--21928808
19
2.9
19
68
15
51
55
0
0
44
0.99
21930407--21930508
44
2.3
44
78
11
111
33
3
2
59
1.30
21930487--21930536
9
5.8
9
74
9
50
24
0
4
72
1.02
21930487--21930535
17
2.9
17
84
0
62
24
0
4
71
1.03
21930926--21930983
27
2.0
27
83
9
71
60
3
3
32
1.30
21931033--21931072
20
2.0
20
85
0
53
45
22
10
22
1.82
21934955--21935008
20
2.8
20
94
5
94
46
0
0
53
1.00
21934955--21935010
18
3.0
18
85
10
76
44
0
0
55
0.99
21938102--21938130
2
15.0
2
92
7
51
48
0
0
51
1.00

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106