Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167882.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_15, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22478863

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   

This is table  73  of  106  ( 12717 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13699955--13700005
21
2.5
20
81
12
59
47
0
0
52
1.00
13699962--13700007
13
4.1
12
76
23
55
52
0
0
47
1.00
13699956--13700005
20
2.4
21
87
9
68
46
0
0
54
1.00
13700096--13700151
11
4.8
11
81
14
60
46
7
0
46
1.30
13700096--13700156
24
2.6
23
75
17
63
49
6
0
44
1.28
13702791--13702826
2
18.0
2
88
0
54
44
0
2
52
1.15
13718313--13718392
40
2.0
40
92
0
133
43
17
10
28
1.81
13724438--13724478
2
20.5
2
84
0
55
43
0
7
48
1.30
13725599--13725652
25
2.0
27
82
10
67
40
14
0
44
1.46
13730066--13730127
31
2.0
31
96
0
115
33
19
14
32
1.92
13730236--13730274
19
2.1
19
85
9
53
10
15
0
74
1.07
13743623--13743647
12
2.1
12
100
0
50
48
0
0
52
1.00
13744005--13744054
18
2.7
18
96
3
91
66
4
0
30
1.10
13746876--13746904
2
14.5
2
100
0
58
0
0
48
51
1.00
13758948--13758979
2
16.0
2
93
0
55
50
0
46
3
1.17
13759326--13759386
32
1.9
32
93
0
104
31
16
9
42
1.81
13762632--13762697
33
2.0
33
90
0
105
28
12
9
50
1.70
13763526--13763558
2
16.5
2
93
0
57
51
0
0
48
1.00
13764069--13764093
2
12.5
2
100
0
50
0
0
48
52
1.00
13775421--13775460
18
2.2
19
86
4
55
52
5
2
40
1.37
13775727--13775774
24
2.1
23
84
7
62
62
0
0
37
0.95
13775748--13775785
17
2.2
18
86
9
53
57
0
0
42
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13775735--13775787
24
2.2
25
80
10
65
54
0
0
45
0.99
13778884--13778913
3
10.0
3
100
0
60
33
0
33
33
1.58
13778894--13779169
153
1.8
153
93
0
480
26
15
25
32
1.95
13782527--13782571
20
2.2
21
88
7
67
57
2
0
40
1.11
13786261--13786306
21
2.2
21
84
7
58
39
17
0
43
1.49
13795274--13795323
22
2.2
22
85
3
64
42
0
2
56
1.11
13795287--13795357
18
3.7
17
76
22
61
36
1
0
61
1.05
13795287--13795361
19
3.9
18
80
16
71
37
1
0
61
1.05
13810419--13810462
2
22.5
2
86
4
63
0
52
2
45
1.13
13812838--13812867
9
3.4
9
90
9
53
23
0
0
76
0.78
13818166--13818195
2
15.0
2
92
0
51
46
0
0
53
1.00
13818648--13818691
23
1.9
23
86
9
63
52
9
18
20
1.72
13824248--13824292
18
2.5
17
85
7
54
48
0
2
48
1.13
13824266--13824349
29
2.9
29
82
7
89
65
2
0
32
1.05
13848317--13848366
19
2.6
19
80
0
64
42
12
18
28
1.85
13852045--13852085
12
3.1
14
80
16
52
31
0
0
68
0.90
13852049--13852090
10
3.7
11
82
17
50
28
0
0
71
0.86
13857653--13857868
102
2.1
103
94
1
380
38
23
14
23
1.92
13860827--13860878
26
2.0
27
85
11
72
23
1
0
75
0.91
13861933--13861966
17
2.0
17
100
0
68
47
23
17
11
1.81
13863554--13863653
50
2.0
50
90
0
155
20
34
17
29
1.95
13864037--13864080
20
2.2
20
87
4
61
72
0
0
27
0.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13865888--13865912
13
1.9
13
100
0
50
60
32
0
8
1.26
13870723--13870817
6
15.3
6
77
8
84
22
2
1
74
0.98
13870726--13870887
35
4.4
35
76
19
143
22
4
1
71
1.13
13870741--13870846
20
5.3
20
69
18
69
21
4
1
71
1.14
13870804--13870859
21
2.7
21
76
15
62
21
7
1
69
1.22
13870834--13870881
21
2.3
20
82
10
53
22
6
2
68
1.23
13871758--13871820
24
2.5
25
80
12
67
47
1
7
42
1.42
13884929--13884960
12
2.8
12
86
13
50
84
0
0
15
0.63
13893816--13893859
11
3.8
11
80
11
52
70
0
2
27
0.99
13893811--13893842
16
2.1
16
94
5
57
71
0
0
28
0.86
13894519--13894559
21
2.0
21
85
9
57
48
0
0
51
1.00
13895677--13895713
16
2.4
16
90
4
58
43
0
0
56
0.99
13902264--13902303
21
1.9
21
84
0
53
47
0
12
40
1.41
13902463--13902492
13
2.2
14
94
5
53
40
0
0
60
0.97
13902461--13902494
14
2.4
15
85
14
54
41
0
0
58
0.98
13902431--13902520
41
2.2
40
79
11
96
44
0
0
55
0.99
13902487--13902528
15
3.0
14
76
10
50
40
0
0
59
0.97
13902487--13902550
28
2.2
29
81
13
71
39
1
1
57
1.17
13903056--13903100
22
2.2
21
84
11
58
6
8
2
82
0.93
13904468--13904509
19
2.0
22
86
13
63
40
2
0
57
1.12
13904651--13904681
15
2.1
15
100
0
62
32
12
6
48
1.67
13907695--13907725
14
2.2
14
94
0
53
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13908249--13908301
15
3.4
16
74
10
56
50
0
0
49
1.00
13908274--13908325
21
2.6
20
88
8
79
50
0
0
50
1.00
13908837--13908898
23
2.8
23
72
15
60
61
0
0
38
0.96
13911145--13911170
2
13.0
2
100
0
52
50
0
0
50
1.00
13911708--13911742
17
2.2
16
90
10
54
37
22
25
14
1.92
13915700--13915724
3
8.3
3
100
0
50
68
0
0
32
0.90
13919263--13919315
25
2.0
25
85
7
70
69
5
22
1
1.19
13924682--13924925
127
1.9
127
96
0
452
33
20
12
33
1.91
13927067--13927097
13
2.4
13
94
0
53
51
0
0
48
1.00
13941435--13941474
17
2.3
19
79
16
50
7
20
5
67
1.34
13942883--13942915
2
16.5
2
100
0
66
48
0
0
51
1.00
13946261--13946298
2
19.5
2
89
5
60
44
0
0
55
0.99
13950700--13950732
8
4.4
8
88
11
52
78
0
0
21
0.75
13951923--13951960
17
2.2
17
90
0
58
60
0
2
36
1.11
13951939--13951984
23
2.0
23
91
0
74
60
0
0
39
0.97
13952425--13952483
18
3.2
17
76
17
64
62
5
8
23
1.43
13952549--13952582
9
3.6
9
85
14
50
35
0
0
64
0.94
13952576--13952614
16
2.5
15
84
15
53
48
0
2
48
1.15
13952896--13952930
13
2.6
14
90
4
54
54
0
0
45
0.99
13952899--13952964
32
2.0
33
82
11
82
60
1
0
37
1.06
13953000--13953042
19
2.4
18
88
7
61
41
4
0
53
1.21
13953226--13953329
40
2.4
45
84
14
137
47
1
0
50
1.19
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13954337--13954369
2
16.5
2
100
0
66
48
0
0
51
1.00
13959507--13959618
57
2.0
57
100
0
224
19
24
20
35
1.96
13972057--13972081
2
12.5
2
100
0
50
52
0
0
48
1.00
13978577--13978624
22
2.2
22
96
3
89
45
0
0
54
0.99
13979173--13979217
22
2.0
23
86
4
65
66
2
2
28
1.15
14003236--14003261
2
13.0
2
100
0
52
50
0
0
50
1.00
14010743--14010790
14
3.5
14
78
16
64
54
0
0
45
0.99
14010748--14010796
12
3.4
16
73
26
63
51
0
0
48
1.00
14010745--14010806
27
2.3
27
97
0
115
53
0
0
46
1.00
14017807--14017831
12
2.1
12
100
0
50
40
0
0
60
0.97
14017818--14017877
23
2.6
23
86
5
77
38
3
1
56
1.26
14019837--14019862
4
6.5
4
100
0
52
23
0
0
76
0.78
14021191--14021217
2
13.5
2
100
0
54
51
0
48
0
1.00
14021392--14021424
2
16.5
2
100
0
66
0
48
0
51
1.00
14023371--14023400
5
6.0
5
100
0
60
60
0
40
0
0.97
14029399--14029428
2
15.0
2
92
0
51
46
0
0
53
1.00
14035076--14035133
26
2.2
26
84
0
71
31
6
5
56
1.47
14038703--14038825
62
2.0
62
82
3
149
34
17
11
37
1.85
14038896--14038927
16
2.0
16
100
0
64
31
25
0
43
1.55
14039420--14039684
62
4.3
60
73
14
200
39
13
12
34
1.82
14039529--14039801
124
2.2
127
79
7
290
42
10
10
35
1.75
14039371--14039835
186
2.5
187
78
9
459
41
13
11
34
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14039556--14039756
62
3.2
60
73
12
163
38
10
12
38
1.78
14043545--14043588
11
3.8
11
79
8
52
47
0
0
52
1.00
14043533--14043595
23
2.8
23
80
7
67
53
0
0
46
1.00
14043598--14043654
17
3.6
16
75
11
55
29
3
1
64
1.20
14045558--14045590
15
2.2
15
94
0
57
6
15
66
12
1.42
14051626--14051837
73
3.0
71
79
6
259
21
29
19
29
1.98
14051986--14052085
50
2.0
50
100
0
200
38
18
28
16
1.91
14058585--14058648
25
2.5
25
79
2
74
23
9
0
67
1.20
14059465--14059506
15
2.7
16
82
14
52
26
0
4
69
1.08
14059938--14059993
25
2.2
25
81
6
60
44
10
3
41
1.56

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106