Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: NW_019167882.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_15, whole genome shotgun sequence Parameters: 2 7 7 80 10 50 1000 Length: 22478863

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   

This is table  82  of  106  ( 12717 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16485147--16485201
5
10.2
5
81
11
56
56
3
40
0
1.17
16491139--16491176
18
2.1
18
90
0
58
42
0
2
55
1.14
16492892--16492944
16
3.1
16
75
8
52
26
0
0
73
0.83
16492886--16492944
15
4.1
14
79
18
59
28
0
0
71
0.87
16492897--16492944
20
2.4
20
89
6
71
27
0
0
72
0.84
16492905--16492945
11
3.9
11
78
12
50
26
0
0
73
0.84
16492956--16493011
26
2.2
26
83
6
69
44
3
1
50
1.29
16492996--16493080
32
2.6
34
79
3
93
58
4
2
34
1.31
16493007--16493075
37
1.9
34
85
8
93
59
4
1
34
1.26
16493723--16493748
3
8.7
3
100
0
52
65
0
0
34
0.93
16493747--16493798
3
17.3
3
89
0
50
23
0
7
69
1.14
16496153--16496220
31
2.3
31
84
5
95
57
8
1
32
1.39
16496153--16496216
29
2.1
29
85
5
83
59
7
1
31
1.35
16496855--16496898
13
3.4
13
81
9
54
31
0
2
65
1.05
16496948--16497006
12
4.4
14
78
16
63
38
0
1
59
1.08
16496983--16497021
20
2.0
20
85
10
53
43
0
2
53
1.14
16500619--16500643
9
2.8
9
100
0
50
60
24
8
8
1.52
16500755--16500821
34
2.0
34
93
0
116
26
7
17
47
1.74
16511845--16511873
2
14.5
2
100
0
58
51
0
0
48
1.00
16514341--16514424
42
2.0
42
97
0
159
19
20
16
44
1.87
16525423--16525448
2
13.0
2
100
0
52
50
0
0
50
1.00
16530107--16530148
18
2.4
17
84
7
57
38
7
11
42
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16531415--16531460
21
2.1
23
84
15
62
32
0
6
60
1.22
16535130--16535321
96
2.0
96
97
0
366
28
20
22
27
1.99
16538786--16538816
2
15.5
2
100
0
62
51
0
0
48
1.00
16540890--16540944
23
2.4
23
75
3
58
49
1
3
45
1.30
16547411--16547447
2
19.0
2
94
5
67
51
0
0
48
1.00
16547887--16547927
15
2.5
17
80
11
50
70
4
0
24
1.06
16555770--16555794
2
12.5
2
100
0
50
48
0
0
52
1.00
16557762--16557813
10
5.2
10
78
13
54
76
3
17
1
1.02
16557762--16557813
21
2.6
19
74
14
50
76
3
17
1
1.02
16563034--16563073
21
1.9
21
84
0
53
72
5
20
2
1.15
16563028--16563079
21
2.6
20
76
8
52
75
3
19
1
1.06
16564643--16564677
18
1.9
18
88
0
52
74
2
0
22
0.95
16565595--16565627
17
1.9
17
100
0
66
66
0
0
33
0.92
16565682--16565716
16
2.1
17
89
5
54
34
5
0
60
1.21
16565679--16565726
17
2.8
17
81
9
62
35
4
0
60
1.16
16565814--16565847
16
2.1
16
88
0
50
47
5
0
47
1.26
16566807--16566838
5
6.4
5
92
0
55
3
40
0
56
1.15
16569728--16569819
1
92.0
1
72
0
67
2
2
9
85
0.76
16569728--16569816
6
14.8
6
86
12
96
2
2
10
85
0.77
16573218--16573308
25
3.4
25
76
19
87
51
2
3
42
1.30
16587508--16587593
29
2.9
30
75
6
86
48
0
8
43
1.32
16589443--16589472
2
15.0
2
92
0
51
50
3
0
46
1.18
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16589439--16589471
10
3.3
10
95
0
57
51
6
0
42
1.26
16590782--16590815
2
17.0
2
100
0
68
50
0
0
50
1.00
16598276--16598319
19
2.3
19
88
11
63
34
0
0
65
0.93
16612231--16612287
28
2.0
28
100
0
114
31
3
21
43
1.69
16622926--16622991
32
2.0
33
83
13
84
43
13
9
33
1.76
16622998--16623055
18
3.1
18
76
13
64
63
0
0
36
0.94
16623008--16623040
14
2.2
15
89
10
50
66
0
0
33
0.92
16623000--16623055
12
4.4
12
76
10
58
66
0
0
33
0.92
16623052--16623077
12
2.2
12
100
0
52
69
0
0
30
0.89
16627235--16627607
186
2.0
182
95
2
674
33
15
15
35
1.90
16631115--16631141
1
27.0
1
100
0
54
0
0
0
100
0.00
16632210--16632264
27
2.0
27
96
0
101
32
23
3
40
1.72
16639339--16639372
17
1.9
18
88
5
52
32
32
14
20
1.93
16653356--16653520
85
1.9
85
86
2
233
47
5
14
32
1.67
16655135--16655173
3
13.0
3
100
0
78
33
0
0
66
0.92
16657645--16657721
36
2.1
36
85
4
102
33
15
18
32
1.92
16661007--16661054
25
2.0
25
83
4
62
27
14
22
35
1.93
16666798--16666848
2
26.5
2
82
7
61
54
1
0
43
1.11
16666799--16666839
17
2.4
17
91
0
64
58
0
0
41
0.98
16667518--16667562
22
2.2
19
84
11
54
40
0
0
60
0.97
16682907--16682961
2
27.5
2
78
7
58
52
5
0
41
1.24
16682916--16682961
12
3.8
12
83
11
67
52
6
0
41
1.27
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16682904--16682960
28
2.0
28
93
0
96
54
7
0
38
1.28
16694828--16694869
19
2.2
20
86
4
59
42
2
0
54
1.13
16709355--16710295
470
2.0
467
93
1
1607
36
13
12
37
1.83
16722297--16722323
2
13.5
2
100
0
54
51
0
0
48
1.00
16722323--16722351
2
14.5
2
100
0
58
51
0
48
0
1.00
16722891--16722949
30
2.0
30
86
0
82
25
16
28
28
1.97
16726984--16727008
2
12.5
2
100
0
50
48
0
0
52
1.00
16733685--16733711
6
4.5
6
100
0
54
0
0
18
81
0.69
16740005--16740056
21
2.5
20
71
3
50
19
5
1
73
1.14
16743705--16743741
19
1.9
19
88
0
56
40
0
2
56
1.13
16744008--16744138
5
25.6
5
76
14
76
35
4
3
57
1.35
16744010--16744142
3
48.3
3
73
16
92
34
4
3
57
1.34
16744010--16744138
18
7.4
16
73
17
105
34
4
3
57
1.35
16744008--16744141
48
2.9
44
77
14
135
35
4
2
57
1.34
16745003--16745048
14
3.3
14
79
17
51
13
4
4
78
1.05
16745023--16745110
17
5.7
15
72
18
65
21
3
1
73
1.04
16745009--16745078
31
2.4
31
84
13
87
17
2
2
77
1.02
16745167--16745193
6
4.5
6
100
0
54
85
0
0
14
0.61
16748777--16748810
17
2.0
17
94
0
59
82
2
8
5
0.93
16750592--16750682
46
2.0
46
95
0
164
19
16
13
50
1.77
16760543--16760573
1
31.0
1
100
0
62
100
0
0
0
0.00
16761064--16761093
2
15.0
2
100
0
60
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16761553--16761582
14
2.1
14
93
0
51
16
6
33
43
1.74
16769040--16769130
46
2.0
46
100
0
182
26
6
18
48
1.72
16771173--16771351
92
1.9
92
96
0
331
45
10
13
30
1.76
16775548--16775615
29
2.3
29
94
0
118
36
4
7
51
1.50
16777448--16777480
3
11.0
3
100
0
66
33
0
0
66
0.92
16778575--16778620
23
1.9
25
82
8
60
47
0
2
50
1.13
16789230--16789295
28
2.4
27
80
14
73
57
4
0
37
1.19
16791931--16791958
3
9.3
3
100
0
56
67
0
0
32
0.91
16794423--16794460
13
2.9
13
100
0
76
55
0
7
36
1.29
16802903--16802935
7
4.7
7
92
7
50
84
0
15
0
0.61
16816750--16816787
19
2.0
19
89
0
58
28
0
2
68
1.03
16837489--16837522
6
5.7
6
92
0
59
82
14
2
0
0.79
16842779--16842807
4
7.5
4
92
7
51
44
0
0
55
0.99
16850363--16850388
2
13.0
2
100
0
52
0
0
50
50
1.00
16857068--16857119
16
3.1
17
83
10
63
55
19
0
25
1.43
16865044--16865073
2
15.0
2
100
0
60
50
0
0
50
1.00
16868192--16868224
2
16.5
2
100
0
66
48
0
0
51
1.00
16869708--16869732
6
4.2
6
100
0
50
0
16
0
84
0.63
16870067--16870096
3
10.0
3
92
0
51
36
0
0
63
0.95
16875816--16875854
2
19.5
2
83
0
51
43
0
7
48
1.31
16880290--16880333
21
2.1
21
86
0
61
27
25
6
40
1.80
16892813--16892846
17
2.1
16
88
5
50
67
0
2
29
1.05
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16902649--16902676
4
7.0
4
100
0
56
25
0
0
75
0.81
16902671--16902708
3
12.7
3
94
0
67
28
0
0
71
0.87
16903113--16903137
12
2.1
12
100
0
50
24
0
0
76
0.80
16905369--16905407
12
3.2
12
82
13
53
48
0
0
51
1.00
16905478--16905518
21
2.0
22
85
9
59
26
4
0
68
1.10
16906169--16906272
37
2.9
36
84
6
124
51
10
0
37
1.36
16908289--16908351
27
2.4
26
86
2
81
39
3
0
57
1.15
16908307--16908343
18
2.1
17
90
5
56
32
2
0
64
1.07
16908305--16908353
13
3.8
13
81
2
55
36
2
0
61
1.08
16908970--16909018
20
2.3
22
86
13
68
59
0
6
34
1.22

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106