Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167893.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_16, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22157061

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   

This is table  113  of  113  ( 13473 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22137603--22137654
17
3.1
16
84
15
61
82
1
13
1
0.84
22137597--22137645
21
2.4
21
82
3
55
81
2
14
2
0.87
22142190--22142673
7
69.0
7
69
12
201
18
1
36
43
1.58
22142191--22142269
19
4.0
18
77
12
68
20
0
30
49
1.49
22142382--22142481
45
2.2
44
78
5
103
16
2
36
46
1.58
22142549--22142593
15
3.1
15
87
3
65
20
0
31
48
1.49
22142885--22143250
43
8.6
43
72
15
194
40
16
13
28
1.86
22142900--22143208
85
3.6
84
75
11
274
41
17
12
29
1.86
22142931--22143038
42
2.5
42
82
8
130
40
10
13
35
1.79
22143098--22143250
44
3.5
42
81
7
146
43
18
11
26
1.84
22142901--22143250
169
2.1
169
79
10
367
40
17
13
28
1.87
22143604--22143640
18
2.1
18
94
0
65
43
8
16
32
1.77
22143660--22143722
18
3.4
18
78
10
65
33
14
20
31
1.92
22143808--22143900
36
2.6
36
82
3
107
43
13
9
33
1.77
22143848--22143941
36
2.6
36
79
3
100
45
13
8
31
1.74
22144675--22144725
22
2.3
22
100
0
102
54
3
7
33
1.47
22145729--22145778
14
3.5
14
76
12
57
4
14
4
78
1.05
22146550--22147015
131
3.6
124
74
12
413
50
12
10
26
1.74
22146650--22147078
139
3.2
137
78
10
449
51
12
10
25
1.72
22148695--22148740
9
4.7
10
78
13
51
82
2
15
0
0.76
22148673--22148728
18
3.2
18
76
5
60
78
0
17
3
0.89
22149080--22149112
11
3.1
11
91
4
50
87
0
12
0
0.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22149080--22149113
10
3.4
10
95
0
59
85
0
14
0
0.60
22150137--22150185
26
1.9
26
87
4
73
67
4
8
20
1.34
22153332--22153819
7
68.4
7
68
14
178
17
2
37
42
1.61
22153392--22153450
29
2.0
29
83
6
75
16
3
38
40
1.66
22153663--22153714
22
2.4
21
81
9
61
19
0
32
48
1.49
22154028--22154181
43
3.6
42
78
11
152
42
12
13
31
1.82
22154073--22154265
43
4.6
41
75
14
146
38
14
15
32
1.87
22154213--22154802
317
1.9
318
94
1
1040
35
18
10
35
1.86
22154957--22155057
36
2.8
37
82
7
100
38
15
16
28
1.90
22155001--22155057
18
3.2
18
79
0
69
42
19
15
22
1.89
22155121--22155201
36
2.2
36
82
4
101
39
16
9
34
1.81

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113

The End!