Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167915.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_18, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20765110

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   

This is table  62  of  117  ( 13967 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13659957--13660290
58
5.8
58
82
8
378
39
8
5
46
1.57
13659957--13660282
116
2.8
115
85
6
433
38
8
5
47
1.58
13660298--13660345
5
9.6
5
82
13
55
81
0
2
16
0.79
13660297--13660350
6
9.2
6
82
13
60
79
0
3
16
0.87
13660303--13660350
24
2.0
24
88
12
71
79
0
4
16
0.89
13660297--13660350
19
3.1
17
85
15
74
79
0
3
16
0.87
13660303--13660350
25
2.0
25
88
12
73
79
0
4
16
0.89
13661065--13661162
26
3.8
26
78
13
114
61
2
4
32
1.26
13661072--13661176
25
4.4
22
75
19
86
60
1
3
34
1.26
13661072--13661176
50
2.2
50
81
11
121
60
1
3
34
1.26
13661393--13661489
41
2.4
41
87
3
133
50
14
11
23
1.75
13673146--13673370
58
3.9
58
85
8
296
39
8
4
48
1.53
13673162--13673370
60
3.6
59
86
8
259
41
6
4
47
1.49
13673146--13673370
118
1.9
114
84
7
301
39
8
4
48
1.53
13673375--13673414
18
2.2
18
86
4
53
75
0
5
20
0.99
13673386--13673504
12
9.7
12
75
15
82
68
2
3
26
1.18
13673437--13673501
3
22.0
3
89
9
98
67
0
1
30
1.00
13673446--13673510
21
3.1
21
86
4
87
72
0
3
24
0.99
13674177--13674232
22
2.6
22
88
2
78
64
1
3
30
1.21
13674193--13674286
6
13.3
7
72
20
56
69
1
2
27
1.07
13674192--13674270
31
2.5
32
82
12
92
67
1
2
29
1.12
13674220--13674289
27
2.6
27
82
11
72
71
0
0
28
0.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13674172--13674289
22
5.4
22
77
9
73
68
0
1
28
1.05
13674247--13674293
6
7.8
6
83
11
53
74
0
0
25
0.82
13674175--13674293
12
9.2
12
67
20
55
68
0
1
28
1.04
13678467--13678519
19
2.9
19
81
13
67
56
0
0
43
0.99
13680366--13680421
19
2.9
19
81
7
60
39
25
12
23
1.89
13683154--13683254
6
15.7
6
73
18
62
77
1
5
14
1.05
13683175--13683241
7
9.6
7
72
23
52
79
2
2
14
0.98
13683154--13683247
13
7.2
13
74
17
63
77
2
5
14
1.04
13683839--13683878
20
2.0
20
95
0
71
37
0
17
45
1.49
13684097--13684375
3
95.0
3
79
10
258
63
3
2
30
1.23
13684565--13684893
111
2.9
111
77
6
254
42
15
19
22
1.88
13684714--13684871
55
2.8
55
80
3
156
44
14
18
21
1.86
13685373--13685407
18
1.9
18
88
11
54
37
17
0
45
1.48
13689205--13689239
5
6.6
5
90
9
52
77
2
2
17
1.02
13690148--13690201
5
10.8
5
81
0
63
57
1
7
33
1.37
13690137--13690201
20
3.2
20
82
2
67
58
4
6
30
1.43
13690223--13690288
3
22.0
3
93
0
114
63
0
3
33
1.10
13690540--13691059
118
4.4
119
80
1
542
44
17
21
17
1.87
13690541--13691062
238
2.2
237
84
2
672
43
17
21
17
1.88
13690989--13691332
172
2.0
172
93
0
589
46
15
18
20
1.84
13695290--13695327
19
2.0
19
100
0
76
15
15
5
63
1.48
13697130--13697159
16
1.9
15
93
6
51
20
3
3
73
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13703772--13703800
14
2.1
14
100
0
58
27
0
20
51
1.47
13703919--13704152
126
1.9
126
85
1
326
37
14
16
32
1.88
13707425--13707495
28
2.5
28
74
0
79
46
22
2
28
1.66
13710491--13710531
21
2.0
21
90
0
64
26
9
21
41
1.84
13711617--13711731
56
2.1
56
93
0
194
32
17
13
37
1.88
13716077--13716123
23
2.0
23
87
0
67
40
2
10
46
1.50
13719582--13719613
16
1.9
17
93
6
57
75
0
12
12
1.06
13719582--13719637
17
3.3
17
83
11
62
76
1
12
8
1.08
13720977--13721122
59
2.5
58
86
7
215
17
2
21
57
1.52
13720977--13721122
58
2.5
58
85
7
206
17
2
21
57
1.52
13728551--13728590
21
1.9
21
84
0
53
32
17
10
40
1.83
13729703--13729781
32
2.5
32
77
8
88
21
21
12
44
1.85
13729939--13730083
32
4.5
32
79
3
130
23
20
7
48
1.74
13729939--13730248
64
4.8
64
76
5
225
20
20
9
49
1.76
13730004--13730248
32
7.7
32
75
5
156
18
20
9
51
1.74
13729961--13730212
128
2.0
128
80
1
290
21
21
9
48
1.78
13730036--13730214
96
1.9
96
81
0
223
19
21
9
49
1.77
13730419--13730521
32
3.3
32
80
9
88
27
13
12
46
1.79
13731748--13731862
60
1.9
59
85
1
158
33
12
10
43
1.76
13734062--13734455
198
2.0
198
94
1
700
18
17
15
48
1.81
13735867--13735922
11
4.9
11
78
20
53
69
0
10
19
1.17
13735869--13735934
16
3.9
16
74
18
62
71
0
9
19
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13735871--13735922
17
3.0
17
78
13
61
71
0
9
19
1.13
13738732--13738785
24
2.2
24
93
0
90
27
12
33
25
1.93
13744712--13744746
16
2.2
16
94
0
61
48
20
14
17
1.81
13746290--13746524
84
2.8
81
83
8
280
42
10
6
40
1.65
13746455--13746775
63
5.1
62
72
9
217
43
8
7
40
1.64
13746499--13746775
62
4.4
62
80
3
313
44
8
7
40
1.62
13746500--13746775
126
2.2
125
92
0
444
44
7
7
40
1.61
13751252--13751306
26
2.2
25
90
6
85
74
1
1
21
1.01
13751263--13751301
18
2.1
19
85
9
53
71
2
2
23
1.10
13752418--13752464
19
2.7
17
81
15
60
55
2
2
40
1.24
13752423--13752461
19
2.1
19
95
0
69
58
2
0
38
1.12
13752826--13752872
22
2.2
21
81
11
51
36
0
2
61
1.08
13755061--13755085
12
2.1
12
100
0
50
40
0
8
52
1.31
13765062--13765112
24
2.1
24
85
7
68
11
13
0
74
1.07
13765062--13765097
11
3.1
11
92
8
54
11
11
0
77
0.99
13776774--13776833
31
1.9
31
86
10
86
65
1
16
16
1.36
13777750--13777788
20
2.0
20
94
0
69
48
5
2
43
1.38
13778381--13778443
6
10.5
6
91
0
99
33
3
14
49
1.59
13778606--13778655
21
2.4
22
76
6
59
40
0
2
58
1.10
13780554--13780710
52
3.0
52
88
3
210
25
26
8
38
1.85
13780735--13780766
11
2.9
11
95
0
55
46
28
0
25
1.53
13785039--13785069
8
3.8
8
95
4
53
54
0
0
45
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13789769--13789794
2
13.0
2
100
0
52
50
0
50
0
1.00
13790769--13790833
24
2.7
24
77
13
71
66
1
0
32
1.01
13790781--13790813
16
2.1
16
94
5
59
72
0
0
27
0.85
13791640--13791682
14
3.0
14
73
6
50
30
9
2
58
1.42
13792005--13792039
9
3.9
9
84
0
52
34
2
0
62
1.10
13792264--13792305
14
2.7
15
82
14
50
50
0
4
45
1.23
13792274--13792303
14
2.2
13
94
5
51
50
0
6
43
1.28
13792607--13792688
25
3.1
25
68
20
60
43
1
1
53
1.16
13796072--13796104
8
4.2
8
96
3
59
60
0
0
39
0.97
13796072--13796212
16
9.1
15
64
19
58
53
2
3
40
1.30
13796062--13796206
24
6.3
23
76
11
95
52
2
3
41
1.33
13796198--13796270
23
3.0
25
70
13
62
57
4
1
36
1.26
13796280--13796317
10
3.8
10
86
10
51
55
0
0
44
0.99
13796382--13796418
16
2.2
17
86
13
51
35
2
5
56
1.36
13811083--13811475
60
6.7
58
85
9
496
35
11
5
46
1.65
13811083--13811475
179
2.2
176
86
7
530
35
11
5
46
1.65
13811491--13811580
5
17.6
5
68
21
53
75
1
6
16
1.07
13811496--13811545
23
2.1
24
85
7
66
78
2
8
12
1.05
13811491--13811550
17
3.6
16
76
10
57
78
1
6
13
1.02
13811592--13811632
21
2.0
20
90
4
64
80
7
0
12
0.90
13811970--13812031
20
3.1
20
95
0
106
33
20
20
24
1.97
13812494--13812521
3
9.3
3
100
0
56
67
0
0
32
0.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13812643--13812692
19
2.6
21
84
15
72
64
2
0
34
1.05
13812642--13812769
10
12.1
11
68
20
69
66
3
0
29
1.10
13812642--13812781
22
6.2
22
66
26
62
66
4
0
29
1.11
13812734--13812787
9
5.5
10
85
14
53
62
7
0
29
1.22
13812642--13812782
16
8.8
16
67
28
61
66
4
0
29
1.10
13814510--13814540
16
1.9
16
93
0
53
32
3
0
64
1.09
13815948--13816062
12
10.3
12
65
16
52
60
2
0
37
1.11
13816050--13816100
25
2.0
25
82
14
61
78
0
1
19
0.85
13827397--13827426
11
2.7
11
89
0
51
20
10
6
63
1.47
13827397--13827438
22
1.9
22
90
0
66
21
11
7
59
1.56

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117