Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167915.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_18, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20765110

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   

This is table  116  of  117  ( 13967 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20649446--20649583
4
34.5
4
67
18
65
26
2
2
68
1.15
20649526--20649568
17
2.3
19
84
11
54
32
2
2
62
1.20
20650200--20650237
20
1.9
20
88
0
58
42
26
15
15
1.87
20650602--20650641
17
2.4
16
84
8
53
22
5
0
72
1.04
20650628--20650675
17
2.8
17
78
9
53
12
6
2
79
1.01
20650628--20650685
14
4.2
14
76
8
57
13
6
1
77
1.05
20650651--20650690
14
2.5
17
73
23
50
15
10
0
75
1.05
20650693--20650929
58
4.0
60
86
9
335
46
8
11
34
1.69
20650693--20650929
59
4.0
60
87
6
340
46
8
11
34
1.69
20654319--20654368
26
1.9
26
87
0
73
32
22
20
26
1.98
20655216--20657764
900
2.8
895
88
2
3739
25
24
24
25
2.00
20657738--20657790
26
2.0
26
89
7
81
28
18
18
33
1.95
20657706--20662706
901
5.6
895
83
5
6103
25
24
24
25
2.00
20660423--20660475
26
2.0
26
89
7
81
24
24
20
30
1.99
20663787--20663839
26
2.0
26
92
0
88
28
24
20
26
1.99
20663971--20664224
137
1.8
139
88
2
395
20
25
29
24
1.99
20664831--20664883
26
2.0
26
100
0
106
30
26
16
26
1.97
20665468--20665764
58
5.0
59
87
4
429
35
12
7
44
1.71
20665468--20665761
117
2.5
117
89
4
441
35
12
7
44
1.71
20665772--20665801
14
2.1
14
93
0
51
76
0
6
16
0.99
20665779--20665829
17
2.9
17
80
11
59
80
1
3
13
0.94
20665782--20665855
17
4.4
16
78
10
58
75
1
5
17
1.06
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20665871--20665917
9
5.2
9
80
14
53
85
4
0
10
0.74
20665867--20665917
24
2.1
24
85
7
68
84
3
0
11
0.75
20666252--20666301
20
2.5
19
78
9
55
16
20
26
38
1.92
20666882--20666946
17
3.8
17
78
17
55
67
1
1
29
1.09
20666890--20666959
17
4.1
17
75
22
58
64
2
1
31
1.17
20666969--20667030
27
2.2
27
80
11
72
69
3
1
25
1.13
20667235--20667283
20
2.5
20
82
0
62
0
4
10
85
0.71
20667291--20667672
42
9.1
41
92
3
611
35
24
17
22
1.95
20667291--20667672
83
4.6
82
92
3
602
35
24
17
22
1.95
20667291--20667672
125
3.0
125
96
0
692
35
24
17
22
1.95
20672833--20673126
58
5.0
58
87
6
423
34
12
7
45
1.71
20672833--20673123
117
2.5
117
89
6
437
34
12
7
45
1.72
20673134--20673191
14
4.2
14
76
8
57
77
1
6
13
1.05
20673141--20673191
17
2.9
17
76
21
52
78
1
5
13
1.02
20673178--20673217
17
2.4
16
84
8
53
72
0
5
22
1.04
20674232--20674279
3
14.7
3
83
12
51
66
0
0
33
0.92
20674231--20674279
13
3.7
13
86
5
71
67
0
0
32
0.91
20674241--20674383
4
35.5
4
69
18
52
67
2
2
27
1.15
20674239--20674373
27
4.7
27
70
15
78
67
2
2
28
1.14
20674321--20674384
12
5.2
12
75
12
58
75
1
1
21
0.98
20674232--20674386
21
7.3
21
66
20
58
67
2
1
27
1.14
20676100--20676152
26
2.0
26
96
0
97
26
24
20
28
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20679236--20679288
26
2.0
26
85
7
72
24
22
20
32
1.98
20680134--20680184
26
2.0
26
96
0
93
25
27
17
29
1.98
20681023--20681075
26
2.0
26
92
0
88
24
24
22
28
2.00
20683739--20683791
26
2.0
26
88
0
79
30
20
16
32
1.95
20678531--20684650
914
6.8
899
87
3
7762
25
24
24
25
2.00
20684781--20684833
26
2.0
26
92
0
88
28
22
20
28
1.99
20684442--20684817
150
2.4
154
82
9
448
19
28
29
21
1.98
20685409--20685460
26
2.0
26
88
0
77
26
23
17
32
1.96
20687745--20687797
26
2.0
26
92
7
90
28
26
16
28
1.97
20689523--20689575
26
2.0
26
88
0
79
24
26
20
28
1.99
20690402--20690453
26
2.0
26
96
0
95
32
23
17
26
1.96
20687656--20695276
889
8.5
891
85
4
9370
25
24
24
25
2.00
20691302--20691354
26
2.0
26
100
0
106
26
26
20
26
1.99
20693089--20693141
26
2.0
26
92
0
88
26
24
18
30
1.98
20694896--20694948
26
2.0
26
96
0
97
26
24
20
28
1.99
20695512--20695564
26
2.0
26
96
0
97
28
24
20
26
1.99
20697289--20697339
26
2.0
26
96
0
93
23
27
19
29
1.98
20698179--20698231
26
2.0
26
100
0
106
26
26
20
26
1.99
20695274--20698659
893
3.8
887
84
5
4290
24
24
24
25
2.00
20698669--20698697
11
2.6
11
100
0
58
31
20
17
31
1.96
20699240--20699269
9
3.3
9
90
0
51
76
0
0
23
0.78
20699243--20699292
20
2.5
20
87
9
68
68
0
0
32
0.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20699259--20699376
17
6.8
17
68
25
61
64
2
2
30
1.20
20699592--20699647
1
56.0
1
78
0
58
0
0
10
89
0.49
20699600--20699646
7
6.9
7
88
11
71
0
0
10
89
0.49
20699592--20699647
14
3.9
14
88
2
85
0
0
10
89
0.49
20699654--20699866
41
5.1
41
91
2
300
35
24
16
23
1.95
20701115--20701200
22
4.0
21
71
16
59
6
17
1
74
1.10
20701114--20701188
17
4.4
17
71
5
62
6
16
1
76
1.07
20705078--20705314
58
4.0
59
88
7
347
34
11
8
45
1.70
20705322--20705379
14
4.2
14
76
8
57
77
1
6
13
1.05
20705329--20705379
17
2.9
17
76
21
52
78
1
5
13
1.02
20706445--20706479
14
2.5
14
90
0
52
71
0
0
28
0.86
20706444--20706594
4
38.2
4
66
18
59
66
3
1
27
1.18
20706445--20706594
16
10.1
14
69
22
76
66
3
2
28
1.18
20706445--20706578
17
7.9
17
72
22
72
66
2
2
28
1.18
20707447--20707499
26
2.0
26
96
0
97
26
24
20
28
1.99
20708346--20708398
26
2.0
26
85
0
70
28
20
20
30
1.98
20707655--20709195
764
2.0
770
90
2
2435
27
24
22
25
2.00
20709110--20709162
26
2.0
26
100
0
106
26
26
20
26
1.99
20710935--20710987
26
2.0
26
88
0
79
24
28
18
28
1.98
20711806--20711859
25
2.2
25
96
0
99
31
22
18
27
1.97
20714324--20714378
26
2.1
26
93
0
92
30
23
16
29
1.96
20716084--20716133
26
1.9
26
100
0
100
26
26
20
28
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20717762--20718059
58
5.0
59
87
3
429
34
12
7
44
1.71
20717762--20718056
118
2.5
117
89
4
441
34
12
7
44
1.72
20718074--20718124
6
8.7
6
77
12
52
82
1
3
11
0.89
20718067--20718096
14
2.1
14
100
0
60
80
0
6
13
0.91
20718074--20718124
17
3.0
16
83
11
66
82
1
3
11
0.89
20718076--20718150
17
4.4
16
78
9
60
76
1
5
17
1.05
20718333--20718370
15
2.4
17
86
8
53
7
23
47
21
1.77
20718552--20718591
20
2.0
20
90
0
62
15
22
27
35
1.94
20718583--20718621
11
3.5
11
85
0
51
28
33
25
12
1.93
20719155--20719217
13
4.9
13
81
11
60
73
4
1
20
1.11
20719155--20719220
23
2.7
24
77
13
64
72
4
1
21
1.10
20719176--20719220
23
2.0
23
86
8
65
77
2
0
20
0.87
20719191--20719337
24
6.6
21
66
21
59
67
4
1
27
1.17
20719202--20719286
25
3.6
24
76
13
63
64
4
1
29
1.21
20719253--20719339
24
3.8
24
75
15
76
67
4
1
26
1.17
20719588--20719850
41
6.3
42
90
4
372
36
22
16
24
1.94
20719588--20719850
83
3.1
83
90
2
402
36
22
16
24
1.94
20719827--20719874
24
2.0
24
100
0
96
37
16
16
29
1.91
20719792--20719916
66
1.9
66
95
3
225
35
21
16
26
1.95
20719853--20720078
42
5.4
42
90
4
368
35
22
18
23
1.96
20719744--20719956
107
2.0
107
94
1
374
36
22
16
24
1.94
20719709--20719999
149
2.0
149
95
1
530
35
21
16
25
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20719853--20720079
83
2.7
84
91
2
377
35
22
18
24
1.96
20721341--20721377
15
2.5
15
90
0
56
0
18
0
81
0.70
20721324--20721380
25
2.2
26
81
9
62
3
17
0
78
0.88
20725238--20725472
58
4.0
60
84
7
295
33
13
8
45
1.73
20725241--20725469
117
1.9
118
89
6
358
33
13
7
45
1.72
20725480--20725538
15
4.1
15
73
16
54
77
1
6
13
1.03
20725525--20725564
17
2.4
16
84
8
53
72
0
5
22
1.04
20726617--20726671
12
4.3
12
78
13
56
74
1
1
21
1.01
20726523--20726670
81
1.8
79
81
8
183
67
4
2
25
1.21
20726538--20726673
21
6.5
21
67
18
61
67
3
2
26
1.19

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117