Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167926.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_19, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20060819

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   

This is table  11  of  117  ( 13965 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1083735--1083759
10
2.5
10
100
0
50
16
0
24
60
1.36
1084347--1084430
22
3.8
22
70
25
61
15
7
1
76
1.06
1084445--1084685
58
4.1
58
83
6
279
46
7
14
31
1.72
1084455--1084690
118
2.0
120
90
3
377
45
8
14
31
1.74
1084653--1084727
37
2.0
37
97
0
141
46
10
13
29
1.76
1084595--1084782
97
2.0
97
88
4
283
45
9
13
32
1.75
1084535--1084841
155
2.0
156
92
1
519
44
9
13
32
1.76
1084475--1084899
214
2.0
215
87
4
617
45
8
12
33
1.73
1084690--1084948
59
4.4
57
88
7
380
44
9
11
34
1.74
1084690--1084948
117
2.2
116
89
6
391
44
9
11
34
1.74
1092404--1092447
21
2.1
21
100
0
88
27
13
13
45
1.81
1092624--1092653
12
2.5
12
88
0
51
16
6
0
76
0.99
1094699--1094725
6
4.5
6
100
0
54
85
0
0
14
0.61
1097351--1097400
15
3.0
15
75
25
55
44
20
6
30
1.75
1099375--1099495
62
1.9
63
83
1
154
38
7
11
42
1.69
1101076--1101133
29
2.0
29
96
0
107
37
18
5
37
1.74
1101264--1101324
24
2.5
24
78
0
68
39
9
8
42
1.68
1102774--1103102
179
1.9
176
84
8
454
38
11
6
43
1.67
1103090--1103122
15
2.2
15
94
0
57
21
0
0
78
0.75
1105447--1105472
4
6.5
4
100
0
52
50
0
0
50
1.00
1105826--1105875
25
2.1
25
81
7
59
26
0
16
58
1.38
1113140--1113198
26
2.3
27
88
8
88
40
0
5
54
1.23
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1118062--1118176
60
1.9
62
81
3
144
29
21
7
40
1.81
1120848--1120892
20
2.2
21
92
4
74
8
51
6
33
1.59
1122926--1122951
9
2.9
9
100
0
52
11
11
30
46
1.76
1135687--1135958
144
1.9
143
87
2
402
34
15
21
28
1.94
1138850--1138923
26
3.3
22
83
12
71
43
0
0
56
0.99
1138845--1138896
26
2.0
26
96
0
95
51
0
0
48
1.00
1138815--1138880
17
3.8
17
72
20
64
51
0
0
48
1.00
1139026--1139062
19
1.9
19
88
0
56
51
0
10
37
1.37
1139602--1139665
32
2.0
31
82
14
78
46
0
1
51
1.10
1140784--1141188
207
2.0
202
83
7
509
35
11
7
45
1.70
1141924--1141974
21
2.4
21
83
9
59
25
11
7
54
1.63
1142476--1142578
55
1.9
55
82
5
131
36
20
12
30
1.90
1142495--1142700
48
4.1
49
78
6
225
36
20
13
29
1.90
1142683--1142730
20
2.3
21
85
3
62
43
18
2
35
1.62
1153940--1153971
13
2.5
13
95
5
57
21
0
3
75
0.95
1154143--1154187
18
2.5
18
82
10
56
33
0
0
66
0.92
1154521--1154564
19
2.3
19
92
0
70
6
22
40
29
1.80
1155388--1155445
26
2.2
26
85
11
75
77
0
15
6
0.97
1160438--1160506
34
2.0
33
83
10
86
55
5
11
27
1.58
1162623--1162785
72
2.3
72
92
2
265
36
14
26
22
1.93
1164882--1164928
23
2.0
25
84
12
64
61
0
2
36
1.08
1165587--1165633
21
2.1
23
80
11
62
27
0
14
57
1.38
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1165780--1165830
25
2.0
26
84
3
68
35
3
0
60
1.15
1165865--1165909
20
2.2
20
84
7
56
64
2
2
31
1.18
1165941--1165976
13
2.8
13
82
0
54
44
5
0
50
1.25
1166257--1166314
26
2.2
26
84
0
71
51
0
13
34
1.42
1166859--1166931
12
6.2
12
72
16
55
50
0
1
47
1.09
1166869--1166941
23
3.2
23
72
27
82
52
0
1
46
1.09
1167635--1167720
6
14.5
6
80
10
72
19
0
1
79
0.80
1167644--1167720
13
5.8
13
76
23
72
20
0
1
77
0.83
1167635--1167721
35
2.5
34
82
12
97
19
0
1
79
0.80
1167635--1167719
11
7.3
11
74
20
75
20
0
1
78
0.81
1167641--1167734
8
11.2
8
71
17
66
20
0
2
77
0.87
1167639--1167731
13
7.1
13
72
21
61
19
0
2
78
0.85
1167640--1167788
61
2.5
60
80
8
151
24
2
1
71
1.07
1167842--1167881
11
3.5
12
75
25
50
27
5
5
62
1.37
1167842--1167904
22
3.0
21
80
15
69
23
3
6
66
1.29
1167878--1167946
9
7.7
9
75
12
52
20
0
5
73
1.03
1167875--1167937
32
2.0
32
84
6
83
20
0
4
74
0.99
1168817--1168911
11
8.4
11
75
13
70
14
5
2
77
1.03
1168803--1168911
5
21.6
5
71
15
66
16
5
1
76
1.06
1168817--1168911
6
15.5
6
69
20
63
14
5
2
77
1.03
1168803--1168873
32
2.2
31
82
9
81
16
5
1
76
1.05
1168822--1168911
32
2.6
33
84
10
110
14
5
2
77
1.04
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1168907--1169427
57
9.1
55
74
11
275
43
6
12
38
1.68
1168938--1169429
58
8.6
58
79
9
476
42
6
13
38
1.69
1168929--1169429
114
4.4
114
83
6
602
42
6
12
37
1.68
1176048--1176510
59
7.7
59
81
8
558
34
14
7
43
1.74
1176048--1176509
118
3.8
118
86
7
626
35
14
7
43
1.74
1176525--1176616
5
18.6
5
78
14
77
79
2
4
14
0.98
1176525--1176605
17
4.6
16
72
20
56
79
2
4
13
1.01
1176525--1176612
36
2.5
35
80
7
97
79
2
4
13
0.98
1176520--1176612
27
3.3
29
78
13
88
78
2
5
13
1.02
1177525--1177605
24
3.4
23
70
16
58
71
3
3
20
1.17
1177555--1177673
17
6.6
17
69
24
52
68
3
1
26
1.15
1177623--1177672
19
2.6
21
84
15
72
64
2
0
34
1.05
1177618--1177683
25
2.8
25
79
18
70
65
3
0
31
1.08
1177620--1177667
22
2.2
22
85
7
62
62
2
0
35
1.07
1177950--1178009
15
4.2
14
79
16
70
0
1
11
86
0.64
1177965--1178008
13
3.5
12
81
9
52
0
2
11
86
0.66
1177950--1178010
27
2.3
26
88
11
88
0
1
13
85
0.68
1178017--1178188
41
4.1
41
93
3
265
36
25
16
22
1.94
1178433--1178486
16
3.5
16
69
19
51
37
16
14
31
1.89
1178422--1178494
30
2.4
30
97
0
137
32
17
17
31
1.94
1179231--1179335
8
12.0
8
73
16
68
9
12
0
77
1.05
1179230--1179334
9
11.7
9
76
13
56
9
11
0
78
1.02
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1179232--1179336
17
6.0
16
74
20
86
10
12
0
76
1.08
1184200--1184241
16
2.6
17
78
14
54
7
28
4
59
1.44
1187715--1188173
62
7.7
59
78
11
449
35
11
7
44
1.70
1187715--1188163
124
3.7
119
86
6
565
36
12
8
43
1.71
1188189--1188258
5
14.6
5
76
16
53
81
1
4
12
0.90
1188189--1188231
17
2.5
17
85
11
52
79
2
2
16
0.95
1188185--1188259
30
2.6
30
82
12
86
80
1
6
12
0.97
1188184--1188259
27
2.8
26
76
4
71
78
1
6
13
0.99
1189257--1189314
22
2.7
22
79
12
59
62
5
0
32
1.18
1192080--1192117
12
3.2
12
88
11
60
73
0
15
10
1.09
1192062--1192100
17
2.3
17
91
8
62
79
2
10
7
1.02
1193120--1193325
41
5.1
41
82
10
183
24
16
21
37
1.93
1193228--1193295
35
1.9
35
91
5
111
22
14
19
44
1.86
1193491--1193598
6
17.5
6
75
15
71
20
2
1
75
1.03
1193491--1193610
11
10.7
11
73
18
88
20
2
2
74
1.06
1193489--1193610
32
4.2
29
67
22
85
21
2
2
73
1.06
1193487--1193618
56
2.4
55
81
12
146
21
3
2
71
1.12
1193521--1193660
56
2.4
56
79
13
142
24
5
1
69
1.17
1193677--1193719
14
2.9
14
82
6
50
34
4
6
53
1.49
1193705--1193767
22
2.9
21
86
9
74
23
4
6
65
1.36
1193705--1193744
11
3.5
12
75
25
50
27
5
5
62
1.37
1193705--1193758
21
2.5
20
88
8
72
24
5
7
62
1.42
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1193705--1193767
21
3.0
21
75
15
58
23
4
6
65
1.36
1194675--1194781
5
20.6
5
69
19
51
15
6
1
75
1.09
1194689--1194771
17
5.1
16
69
16
55
13
7
2
77
1.08
1194689--1194745
11
5.5
10
83
8
53
12
7
1
78
1.01
1194694--1194785
32
3.0
30
79
14
82
13
7
2
77
1.07
1194697--1194781
37
2.3
36
78
11
93
14
5
2
77
1.05
1194799--1195238
56
7.7
57
80
6
417
42
6
14
36
1.71
1194800--1195238
114
3.8
114
83
6
525
42
6
14
36
1.71
1196491--1196540
25
2.0
26
84
4
66
34
0
2
64
1.05
1196487--1196538
13
4.2
12
78
7
50
36
0
1
61
1.07

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117