Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167926.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_19, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20060819

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   

This is table  117  of  117  ( 13965 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20024747--20031669
899
7.8
900
85
4
8721
25
23
24
26
2.00
20027142--20027203
26
2.5
26
81
5
74
27
19
24
29
1.98
20028047--20028099
26
2.0
26
85
0
70
32
16
22
28
1.96
20028945--20028994
26
1.9
26
100
0
100
28
22
26
24
1.99
20029825--20029877
26
2.0
26
85
0
70
32
16
22
28
1.96
20030686--20030738
26
2.0
26
96
0
97
26
18
26
28
1.98
20032330--20032382
26
2.0
26
88
0
79
30
18
24
26
1.98
20033226--20033278
26
2.0
26
85
0
70
33
18
22
24
1.97
20037440--20037491
26
2.0
26
92
0
86
28
17
25
28
1.97
20037623--20037674
26
2.0
26
96
0
95
26
19
25
28
1.98
20037410--20037834
184
2.3
185
81
3
498
22
28
26
22
1.99
20038521--20038573
26
2.0
26
85
7
72
24
18
26
30
1.98
20039403--20039455
26
2.0
26
88
0
79
28
16
24
30
1.97
20041161--20041213
26
2.0
26
96
0
97
26
18
28
26
1.98
20042057--20042109
26
2.0
26
88
0
79
30
16
24
28
1.97
20040286--20044061
887
4.2
883
88
3
5361
24
24
25
24
2.00
20043819--20043871
26
2.0
26
92
0
88
24
22
26
26
2.00
20043845--20044208
154
2.3
158
83
4
434
23
28
28
18
1.98
20044866--20044918
26
2.0
26
88
0
79
28
18
26
26
1.98
20045757--20045810
27
2.0
26
89
10
83
27
18
27
25
1.98
20044004--20046735
893
3.1
888
86
2
3362
25
24
24
25
2.00
20048755--20048804
26
1.9
26
95
0
91
28
20
26
26
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20049643--20049695
26
2.0
26
96
0
97
26
18
26
28
1.98
20050081--20050135
25
2.1
26
80
12
60
25
5
20
49
1.70
20048009--20055385
891
8.3
888
84
6
8778
25
24
25
25
2.00
20050547--20050594
25
1.9
25
100
0
96
25
20
27
27
1.99
20051443--20051520
26
3.0
26
82
12
99
28
16
24
30
1.97
20052164--20052198
12
2.9
12
95
0
61
37
17
31
14
1.89
20054120--20054172
26
2.0
26
92
0
88
26
16
26
30
1.97
20055859--20055980
7
16.7
7
72
9
84
15
5
2
76
1.08
20055884--20056017
68
2.0
65
80
9
146
18
4
3
73
1.16
20056595--20056714
7
15.7
7
70
15
62
15
6
2
75
1.11
20056621--20056695
33
2.4
31
81
4
87
14
5
2
77
1.06
20056675--20056713
18
2.2
18
86
9
53
12
7
0
79
0.93
20057327--20057396
7
9.6
7
75
9
59
15
5
2
75
1.11
20055385--20060819
710
7.5
731
93
3
8925
16
11
4
67
1.38
20058060--20058103
7
5.9
7
80
15
52
15
4
0
79
0.89
20058059--20058153
16
5.8
15
70
16
55
13
7
2
76
1.08
20058771--20058840
7
9.6
7
75
9
59
15
5
2
75
1.11
20059503--20059626
7
16.9
7
71
14
63
13
7
2
76
1.09
20059554--20059600
23
2.0
25
83
8
62
12
6
4
76
1.12
20059574--20059626
18
2.7
19
72
21
56
13
9
0
77
0.99
20058066--20060819
738
3.8
729
93
3
4668
16
11
4
67
1.38
20060242--20060311
7
9.6
7
75
9
59
15
5
2
75
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20060498--20060536
18
2.2
18
86
9
53
7
12
5
74
1.20

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117

The End!