Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167926.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_19, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20060819

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   

This is table  97  of  117  ( 13965 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17356196--17357666
714
2.1
719
90
1
2344
26
23
23
26
2.00
17359624--17359654
15
2.1
15
93
0
53
3
74
22
0
0.96
17360534--17360586
26
2.0
26
96
0
97
28
26
18
26
1.98
17361418--17361470
26
2.0
26
96
0
97
28
26
18
26
1.98
17363159--17363211
26
2.0
26
89
7
81
30
24
16
28
1.97
17365842--17365894
26
2.0
26
92
0
88
30
26
18
24
1.98
17363132--17375416
893
13.8
894
85
4
15187
25
24
23
25
2.00
17375185--17375242
27
2.2
25
81
6
71
53
17
6
22
1.67
17375186--17375249
26
2.5
27
80
7
62
53
15
7
23
1.68
17376563--17376613
26
2.0
26
92
0
84
31
25
15
27
1.96
17378347--17378399
26
2.0
26
96
0
97
32
26
15
26
1.95
17376493--17381874
885
6.1
884
88
3
6963
25
24
24
25
2.00
17379232--17379284
26
2.0
26
96
0
97
32
26
15
26
1.95
17381699--17382037
147
2.3
147
85
2
457
19
28
29
22
1.98
17382878--17382930
26
2.0
26
96
0
97
28
26
18
26
1.98
17382904--17384394
718
2.1
720
89
1
2303
27
24
22
25
2.00
17384501--17384553
26
2.0
26
92
0
88
24
26
20
28
1.99
17385360--17386863
709
2.1
711
88
1
2197
26
24
23
26
2.00
17386969--17387021
26
2.0
26
96
0
97
28
26
18
26
1.98
17386995--17394357
722
10.1
717
80
10
7437
26
23
22
26
2.00
17395342--17395394
26
2.0
26
92
0
88
30
26
16
26
1.97
17396243--17396293
26
2.0
26
92
0
84
27
25
19
27
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17393596--17402599
900
10.1
895
88
3
11480
26
24
23
25
2.00
17397139--17397190
25
2.0
26
88
3
79
26
26
21
25
1.99
17398036--17398088
26
2.0
26
92
0
88
26
26
20
26
1.99
17398934--17398986
26
2.0
26
92
0
88
26
26
20
26
1.99
17400697--17400749
26
2.0
26
96
0
97
28
26
18
26
1.98
17399991--17402600
886
3.0
875
86
4
3519
25
25
22
26
2.00
17402411--17402798
205
1.9
206
88
0
589
17
27
28
26
1.98
17403565--17403617
26
2.0
26
92
0
88
30
26
16
26
1.97
17407906--17407958
26
2.0
26
96
0
97
28
26
18
26
1.98
17408796--17408848
26
2.0
26
96
0
97
28
26
18
26
1.98
17407187--17416643
890
10.7
891
85
4
11586
25
25
23
25
2.00
17410566--17410617
26
2.0
26
88
0
77
23
25
21
30
1.99
17414092--17414144
26
2.0
26
92
0
88
28
20
18
32
1.97
17412310--17416643
909
4.8
900
87
3
5892
25
24
23
25
2.00
17414994--17415046
26
2.0
26
96
0
97
26
28
18
26
1.98
17415892--17415944
26
2.0
26
92
0
88
30
26
16
26
1.97
17419971--17420022
25
2.0
26
88
3
79
26
25
21
26
1.99
17420873--17420924
26
2.0
26
92
0
86
28
25
19
26
1.98
17419102--17424396
892
6.0
892
85
4
6535
25
24
24
25
2.00
17421763--17421813
26
2.0
26
92
0
84
27
25
15
31
1.96
17423981--17424038
26
2.2
26
81
0
71
60
8
8
22
1.53
17423797--17424987
595
2.0
595
86
1
1674
29
24
21
25
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17424992--17425044
26
2.0
26
96
0
97
28
26
18
26
1.98
17426762--17426812
25
2.0
26
88
7
79
31
23
15
29
1.95
17427630--17427681
26
2.0
26
92
0
86
28
21
19
30
1.97
17429424--17429474
26
2.0
26
92
3
86
29
25
19
25
1.99
17432963--17433015
26
2.0
26
92
0
88
28
22
20
28
1.99
17424392--17447983
893
26.4
878
77
10
18094
25
24
23
25
2.00
17438743--17438805
26
2.5
26
80
10
69
50
19
7
22
1.72
17438744--17438798
27
2.2
24
83
9
65
52
18
7
21
1.69
17439177--17439229
26
2.0
26
88
0
79
28
26
18
26
1.98
17443011--17443063
26
2.0
26
88
0
79
28
22
18
30
1.98
17444740--17444792
26
2.0
26
96
0
97
28
26
18
26
1.98
17446496--17446545
26
1.9
26
95
0
91
24
28
18
30
1.97
17443976--17447964
864
4.6
864
84
7
4490
26
23
23
25
2.00
17451094--17451146
26
2.0
26
96
0
97
28
24
20
26
1.99
17451843--17451893
26
2.0
26
88
0
75
27
21
21
29
1.99
17451083--17452609
742
2.1
746
89
2
2291
26
23
23
26
2.00
17452742--17452794
26
2.0
26
96
0
97
28
24
20
26
1.99
17452875--17452907
11
3.0
11
95
0
57
21
36
33
9
1.85
17453653--17453704
26
2.0
25
92
3
86
26
25
19
28
1.98
17454542--17454594
26
2.0
26
100
0
106
26
26
20
26
1.99
17451830--17456577
913
5.3
887
83
6
5649
25
24
24
25
2.00
17457103--17457208
21
4.9
19
70
21
68
77
3
6
12
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17457096--17457200
8
12.8
8
69
9
59
77
2
5
14
1.07
17457602--17457657
15
3.8
15
75
17
55
75
1
8
14
1.13
17457672--17457737
7
9.3
7
76
3
60
74
3
4
18
1.12
17458585--17458629
19
2.5
17
85
7
54
80
6
6
6
1.04
17459136--17459201
7
9.3
7
76
3
60
74
3
4
18
1.12
17459810--17459861
15
3.5
15
80
15
54
75
1
9
13
1.14
17459879--17459944
7
9.3
7
76
3
60
74
3
4
18
1.12
17457320--17460638
741
4.5
751
92
5
5604
67
4
10
17
1.36
17460552--17460590
15
2.4
16
79
12
53
76
0
7
15
0.99
17460551--17460684
16
8.6
15
71
21
71
74
3
8
13
1.18
17460560--17460629
15
4.9
14
76
10
52
77
2
5
14
1.07
17460597--17460670
29
2.6
27
79
12
85
78
4
4
13
1.04
17460612--17460664
18
3.1
18
81
8
65
81
3
3
11
0.96
17457320--17468594
747
15.4
738
87
9
13758
67
4
10
17
1.36
17461337--17461380
8
5.7
7
82
17
52
79
0
6
13
0.92
17461337--17461381
16
2.9
16
86
3
65
80
0
6
13
0.91
17462015--17462055
21
1.9
21
85
5
55
78
2
4
14
1.03
17462063--17462124
7
8.6
7
73
7
52
74
3
4
17
1.13
17462630--17462685
22
2.6
21
80
8
51
73
3
8
14
1.21
17462650--17462693
14
3.0
14
78
12
52
79
2
9
9
1.02
17462714--17462817
24
4.3
23
70
19
61
74
1
5
18
1.12
17462736--17462791
19
3.2
16
77
20
51
75
3
3
17
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17462758--17462817
23
2.6
23
80
15
61
73
1
3
21
1.07
17462773--17462840
7
8.9
7
77
16
55
75
2
4
17
1.10
17462788--17462853
33
1.9
35
82
11
84
74
3
7
15
1.17
17463450--17463506
15
3.8
16
75
11
57
77
1
7
14
1.06
17463475--17463514
21
1.9
21
85
10
55
75
2
5
17
1.10
17463519--17463582
7
9.3
7
75
8
51
76
1
4
17
1.03
17463613--17463649
20
1.9
19
89
10
58
72
5
2
18
1.15
17464197--17464252
15
3.8
15
75
17
55
75
1
8
14
1.13
17463563--17467895
703
6.0
700
81
12
4433
67
4
10
17
1.36
17464964--17465029
7
9.3
7
80
3
69
75
1
4
18
1.04
17464265--17466460
735
3.0
736
92
5
3557
67
4
10
17
1.36
17465699--17465764
7
9.3
7
76
3
60
74
3
4
18
1.12
17466370--17466408
15
2.5
16
83
4
53
79
0
7
12
0.93
17466801--17466838
18
2.1
18
90
5
58
81
2
7
7
0.96
17467099--17467159
19
3.1
19
83
9
70
73
6
3
16
1.17
17467147--17467191
14
3.1
14
81
12
56
75
0
6
17
1.01
17467127--17467192
15
4.4
14
75
16
53
75
1
4
18
1.04
17467866--17467908
5
7.5
6
89
10
56
74
0
0
25
0.82
17467858--17467904
23
2.0
23
84
8
60
76
2
0
21
0.89
17467807--17467953
6
22.7
6
69
20
59
75
3
4
17
1.09
17467858--17467954
7
13.6
7
71
12
63
75
4
2
18
1.06
17468602--17468764
12
13.3
12
65
21
63
75
3
3
17
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17468602--17468757
11
13.4
11
67
19
52
75
3
3
17
1.11
17468563--17468724
48
3.5
48
75
14
115
73
4
5
16
1.19
17467103--17468694
761
2.1
760
85
8
2239
68
4
9
17
1.34
17468666--17468767
22
4.7
21
70
14
73
76
3
1
17
1.03
17468585--17468767
10
19.2
9
65
20
63
75
4
3
16
1.09
17468656--17468766
37
3.2
34
78
15
111
76
3
2
17
1.04
17468846--17468905
21
2.7
23
82
7
63
70
6
5
18
1.29
17470592--17472817
879
2.5
874
92
3
3708
44
23
11
21
1.84
17474625--17474676
26
2.0
26
92
3
88
26
23
21
28
1.99
17475517--17475569
26
2.0
26
96
0
97
28
26
18
26
1.98

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117