Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167971.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_23, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19268551

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   

This is table  102  of  120  ( 14389 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14393297--14393337
16
2.9
14
83
16
50
51
0
0
48
1.00
14395323--14395355
2
16.5
2
100
0
66
51
0
0
48
1.00
14400542--14400580
21
1.9
21
89
5
62
28
0
2
69
1.02
14404511--14404540
3
10.0
3
100
0
60
33
0
0
66
0.92
14404883--14404930
21
2.3
21
82
7
62
66
10
6
16
1.41
14405403--14405445
23
1.9
22
90
4
68
16
0
11
72
1.13
14405449--14405489
3
13.7
3
100
0
82
31
0
0
68
0.90
14405679--14405722
15
2.9
15
77
12
54
77
4
2
15
1.04
14405880--14405915
14
2.5
15
90
4
56
77
2
0
19
0.88
14409835--14409867
16
2.1
16
94
0
57
39
9
24
27
1.85
14414435--14414842
101
4.0
101
82
7
567
24
24
20
30
1.98
14414593--14414741
47
3.0
49
76
14
187
20
24
19
35
1.96
14414480--14414854
201
1.9
201
97
0
714
24
25
19
31
1.98
14418885--14418934
2
25.0
2
95
0
91
48
0
2
50
1.12
14418888--14418959
8
9.0
8
96
0
81
38
0
11
50
1.38
14418924--14418973
4
12.5
4
86
0
73
28
0
24
48
1.52
14418885--14418954
12
5.8
12
94
0
86
41
0
8
50
1.33
14418973--14419004
2
16.0
2
93
0
55
46
0
50
3
1.17
14422502--14422575
25
3.0
25
69
23
66
52
1
0
45
1.09
14422982--14423055
30
2.5
31
82
4
98
55
0
0
44
0.99
14422973--14423031
25
2.5
23
77
17
68
57
0
0
42
0.98
14422973--14423042
23
3.0
22
72
13
61
57
0
0
42
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14433000--14433035
16
2.2
16
90
9
56
86
2
0
11
0.68
14436689--14436720
16
2.0
17
88
11
50
34
0
18
46
1.49
14439433--14439477
21
2.1
22
87
4
65
31
13
0
55
1.38
14441004--14441035
6
5.3
6
100
0
64
34
50
0
15
1.45
14441054--14441086
16
2.1
16
100
0
66
42
0
0
57
0.98
14441103--14441161
27
2.2
27
81
6
66
49
8
3
38
1.50
14442221--14442251
15
2.1
15
93
0
53
35
35
22
6
1.80
14448407--14448446
14
2.8
15
85
14
50
45
0
10
45
1.37
14450666--14450714
21
2.3
21
86
13
66
48
0
2
48
1.12
14460170--14460195
9
2.9
9
100
0
52
65
11
0
23
1.25
14466856--14466881
13
2.0
13
100
0
52
38
0
0
61
0.96
14467086--14467129
16
2.9
15
80
12
54
50
9
0
40
1.34
14473582--14473668
41
2.1
41
81
8
97
42
4
9
43
1.57
14481581--14481610
14
2.1
14
93
0
51
36
33
0
30
1.58
14482493--14482578
41
2.1
41
97
0
163
36
12
18
32
1.89
14490110--14490141
3
10.7
3
100
0
64
34
0
0
65
0.93
14490951--14490997
6
7.7
6
97
2
85
29
0
0
70
0.88
14490938--14491000
18
3.3
20
84
10
80
25
0
0
74
0.82
14490937--14491025
12
7.5
12
85
7
85
22
0
3
74
0.97
14490993--14491031
12
3.2
12
85
10
53
20
0
10
69
1.17
14490993--14491043
24
2.1
24
82
7
59
21
0
9
68
1.18
14491456--14491488
10
3.2
11
91
8
52
75
6
0
18
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14491916--14491956
13
2.9
14
82
10
57
39
7
2
51
1.43
14503553--14503701
40
3.8
39
85
0
190
26
10
18
45
1.80
14503553--14503701
79
1.9
80
90
1
237
26
10
18
45
1.80
14503841--14504017
39
4.5
39
79
6
162
27
12
18
41
1.86
14503940--14504040
40
2.6
39
77
1
103
26
10
21
40
1.86
14504195--14504220
3
8.7
3
100
0
52
34
0
0
65
0.93
14505058--14505108
24
2.1
24
88
3
75
15
0
13
70
1.17
14505070--14505108
12
3.2
13
89
10
64
15
0
12
71
1.14
14505075--14505116
12
3.6
11
87
9
57
16
0
11
71
1.14
14505073--14505123
24
2.1
24
85
7
68
19
0
9
70
1.14
14505707--14505773
25
2.7
24
77
15
66
64
1
2
31
1.18
14511209--14511264
26
2.3
23
76
14
58
28
0
5
66
1.14
14511273--14511358
18
5.1
17
71
21
56
65
0
0
34
0.93
14511310--14511353
12
3.6
12
77
17
54
70
0
0
29
0.88
14511296--14511358
25
2.5
25
89
2
99
69
0
0
30
0.88
14512289--14512313
2
12.5
2
100
0
50
52
0
0
48
1.00
14516117--14516167
25
2.0
25
92
0
84
29
27
7
35
1.85
14522378--14522407
2
15.0
2
100
0
60
0
50
0
50
1.00
14522409--14522446
2
19.5
2
84
15
53
47
2
0
50
1.15
14532531--14532568
17
2.1
17
90
9
58
10
7
0
81
0.87
14533933--14533978
22
2.1
22
95
0
83
52
0
0
47
1.00
14544255--14544313
29
2.0
30
93
3
102
33
10
11
44
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14548479--14548530
21
2.5
22
71
9
54
63
11
3
21
1.43
14549198--14549227
2
15.0
2
100
0
60
50
0
0
50
1.00
14550651--14550690
21
1.9
21
89
0
62
52
5
0
42
1.23
14551730--14551796
16
4.1
17
71
11
59
46
1
1
50
1.19
14553241--14553279
21
1.9
21
85
15
55
35
7
12
43
1.72
14559859--14559884
2
13.0
2
100
0
52
50
0
0
50
1.00
14562346--14562384
11
3.8
10
86
13
53
0
10
2
87
0.65
14562607--14562660
2
27.5
2
81
3
65
42
1
5
50
1.36
14563844--14563904
30
2.0
30
93
0
104
40
6
3
49
1.45
14563998--14564064
34
2.0
34
96
0
125
46
19
10
23
1.81
14566180--14566226
18
2.8
17
81
9
53
57
0
2
40
1.11
14566891--14566949
24
2.5
22
76
15
64
52
0
0
47
1.00
14566902--14566957
24
2.2
24
87
9
76
48
0
0
51
1.00
14576061--14576110
24
2.0
25
85
11
68
50
6
2
42
1.38
14576622--14576700
31
2.7
28
77
11
86
41
3
2
51
1.33
14576856--14576941
24
3.4
24
80
13
100
34
1
4
59
1.26
14576856--14576946
28
3.4
28
83
7
109
35
1
4
59
1.25
14582073--14582143
34
2.1
35
89
2
108
38
7
7
47
1.58
14583986--14584218
60
4.0
58
88
6
346
34
12
8
44
1.73
14583988--14584203
114
1.9
116
92
3
366
35
13
8
43
1.74
14584182--14584254
36
1.9
37
89
8
112
27
12
5
54
1.59
14584127--14584302
96
1.8
97
97
1
336
32
13
6
48
1.67
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14584402--14584445
23
1.9
23
85
0
61
79
6
6
6
1.06
14584761--14584804
20
2.2
20
100
0
88
29
15
27
27
1.96
14584926--14584980
26
2.2
25
83
9
67
43
16
5
34
1.71
14585347--14585380
17
1.9
18
88
5
52
79
2
2
14
0.97
14585406--14585516
16
6.6
16
66
22
50
64
7
0
27
1.19
14585376--14585474
35
2.8
35
74
17
89
61
6
1
31
1.27
14585354--14585519
67
2.4
70
76
11
166
65
5
1
27
1.22
14592560--14592608
2
24.5
2
100
0
98
51
0
0
48
1.00
14592468--14592684
120
1.8
120
100
0
434
41
5
13
38
1.68
14594065--14594165
44
2.3
44
85
1
130
34
10
14
39
1.82
14594667--14594701
16
2.2
16
94
0
61
85
8
0
5
0.73
14595876--14596143
59
4.6
59
85
6
366
36
12
6
44
1.68
14595876--14596148
116
2.3
116
91
4
433
36
12
6
45
1.68
14595876--14596144
58
4.6
58
87
5
382
36
12
6
44
1.68
14598514--14598556
20
2.2
20
83
8
52
72
2
4
20
1.14
14598450--14598685
118
2.0
118
99
0
463
55
9
7
27
1.60
14598632--14598688
20
2.8
20
75
15
55
71
1
3
22
1.10
14598659--14598700
14
3.1
14
80
6
52
73
0
4
21
1.01
14599302--14599348
23
2.1
22
84
11
60
78
2
2
17
0.94
14599324--14599362
19
1.9
19
85
10
51
74
0
5
20
1.01
14599692--14599799
31
3.4
31
74
15
114
50
31
1
15
1.55
14599674--14599815
71
2.0
72
82
6
173
50
28
1
19
1.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14599782--14599879
7
13.0
8
69
17
50
50
26
2
21
1.60
14599835--14599875
15
2.8
15
85
3
57
58
26
2
12
1.46
14603923--14603959
2
18.5
2
100
0
74
51
0
48
0
1.00
14604949--14605005
30
1.9
30
92
0
96
50
5
0
43
1.24
14610218--14610247
4
7.5
4
100
0
60
50
0
0
50
1.00
14612081--14612500
214
2.0
214
87
2
612
44
14
9
32
1.76
14617595--14617681
29
3.0
30
81
8
92
45
1
1
51
1.16
14618344--14618393
18
2.8
18
71
20
50
54
2
0
44
1.11
14619647--14619729
42
2.0
42
88
4
123
42
14
10
32
1.80
14623646--14623714
27
2.5
27
79
13
70
73
4
1
20
1.07

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120