Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167971.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_23, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19268551

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   

This is table  108  of  120  ( 14389 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15627240--15627274
12
3.0
12
95
4
63
25
34
8
31
1.86
15631901--15631955
2
27.5
2
96
0
101
0
50
0
49
1.00
15634805--15634829
2
12.5
2
100
0
50
48
0
0
52
1.00
15634872--15634904
17
1.9
17
100
0
66
36
18
24
21
1.95
15638205--15638339
68
2.0
67
92
1
225
38
9
5
45
1.61
15641923--15641974
20
2.5
20
81
3
59
48
1
9
40
1.47
15642044--15642110
17
3.9
16
86
11
89
28
2
0
68
1.04
15642043--15642111
8
8.1
8
80
12
75
27
2
0
69
1.02
15642918--15642944
2
13.5
2
100
0
54
51
0
0
48
1.00
15643843--15643885
18
2.4
18
84
7
52
34
0
0
65
0.93
15643904--15643958
20
2.5
20
82
11
56
60
1
1
36
1.18
15644746--15644778
16
2.0
17
88
5
50
63
3
0
33
1.10
15645391--15645488
21
4.7
21
73
5
81
36
9
5
48
1.57
15645454--15645502
21
2.3
21
82
6
64
38
4
2
55
1.31
15647726--15647771
25
2.0
23
83
12
58
58
0
2
39
1.10
15657682--15657717
18
2.0
18
100
0
72
33
5
22
38
1.77
15657763--15657825
26
2.4
25
77
12
65
33
12
11
42
1.78
15659302--15659338
2
18.5
2
100
0
74
51
0
0
48
1.00
15666123--15666179
25
2.3
25
87
3
80
45
0
3
50
1.18
15673000--15673371
191
1.9
191
92
0
618
39
9
11
39
1.74
15678936--15678965
3
10.0
3
92
0
51
0
36
0
63
0.95
15684192--15684235
22
2.0
22
95
0
79
36
11
9
43
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15688076--15688119
22
2.0
22
95
0
79
36
11
9
43
1.72
15695579--15695611
2
16.5
2
100
0
66
51
0
0
48
1.00
15699418--15699510
31
3.0
32
79
3
109
40
10
5
43
1.62
15699593--15699633
20
2.1
19
86
4
55
43
2
0
53
1.13
15699610--15699693
14
6.2
14
73
19
63
48
3
0
47
1.19
15699836--15699881
11
4.4
11
75
10
51
63
0
4
32
1.14
15699836--15699878
20
2.1
21
91
4
70
62
0
4
32
1.15
15703458--15703497
21
1.9
21
89
0
62
37
10
15
37
1.80
15705318--15705381
29
2.2
29
80
5
76
53
1
0
45
1.10
15705368--15705415
21
2.3
21
85
3
62
35
4
2
58
1.29
15705473--15705515
17
2.7
16
86
10
61
51
0
4
44
1.22
15705493--15705567
27
2.5
32
75
20
90
52
1
0
46
1.09
15705493--15705567
29
2.6
29
79
10
91
52
1
0
46
1.09
15705614--15705683
15
4.6
13
71
28
50
45
1
0
52
1.09
15705606--15705682
18
4.5
18
72
18
58
42
1
0
55
1.07
15705612--15705709
34
3.3
29
73
25
80
45
1
0
53
1.07
15705662--15705719
9
6.6
9
75
18
59
46
0
0
53
1.00
15705659--15705718
25
2.4
26
88
5
88
45
0
0
55
0.99
15705667--15705730
17
3.4
18
77
14
60
43
0
1
54
1.09
15706731--15706920
61
3.1
60
80
8
204
38
21
5
33
1.77
15712665--15712730
24
2.9
23
72
16
66
56
7
7
28
1.55
15712948--15712987
10
4.0
10
84
12
55
40
0
0
60
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15713386--15713424
16
2.4
16
87
8
53
46
0
5
48
1.24
15713483--15713513
16
1.9
16
93
0
53
58
3
0
38
1.15
15715192--15715226
16
2.2
16
89
0
52
51
17
2
28
1.59
15717297--15717493
106
1.9
105
81
9
240
40
8
9
42
1.66
15717484--15717532
24
2.0
24
84
0
62
44
0
4
51
1.20
15718881--15718932
21
2.4
22
80
3
61
59
3
5
30
1.39
15720835--15721041
102
2.0
102
100
0
414
33
15
17
33
1.91
15723771--15723822
27
1.9
27
92
7
88
26
5
36
30
1.80
15723805--15723865
6
10.2
6
90
0
86
22
0
47
29
1.52
15724236--15724334
18
5.7
17
70
15
78
38
25
4
32
1.75
15725695--15725720
13
2.0
13
100
0
52
76
7
0
15
0.99
15729573--15729632
29
2.1
29
93
0
102
35
8
20
36
1.82
15730808--15730845
20
1.9
20
88
0
58
65
2
7
23
1.32
15747105--15747171
25
2.7
23
84
13
89
49
7
0
43
1.31
15748184--15748295
12
9.5
11
69
13
64
71
6
2
19
1.20
15748243--15748284
4
10.8
4
84
5
59
71
0
4
23
1.05
15748243--15748284
19
2.2
20
86
4
59
71
0
4
23
1.05
15748519--15748712
44
4.4
44
81
3
212
47
15
11
25
1.79
15748523--15748710
88
2.1
88
85
1
252
48
16
10
24
1.78
15749063--15749107
19
2.4
18
81
3
54
31
11
17
40
1.85
15748952--15749199
96
2.6
95
86
6
328
37
12
11
38
1.80
15749142--15749208
16
4.1
17
72
12
61
34
11
16
37
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15749461--15749545
43
2.0
44
84
8
115
37
18
11
31
1.87
15750722--15750768
21
2.2
21
84
0
58
10
19
2
68
1.30
15750758--15750785
10
2.8
10
100
0
56
10
10
0
78
0.96
15751135--15751180
14
3.3
14
82
11
58
4
2
8
84
0.83
15751125--15751186
20
3.3
18
82
10
70
4
4
6
83
0.89
15751124--15751191
28
2.4
29
80
9
79
5
5
5
82
0.95
15756357--15756404
23
2.2
21
85
7
60
75
12
2
10
1.14
15756899--15756939
3
13.7
3
100
0
82
65
0
0
34
0.93
15758973--15759024
16
3.1
17
75
13
54
51
3
0
44
1.19
15759292--15759333
17
2.4
17
80
11
50
33
0
2
64
1.07
15765867--15765904
10
3.7
10
83
16
51
68
10
2
18
1.30
15765868--15765906
11
3.6
11
86
3
53
69
10
2
17
1.28
15766096--15766140
20
2.2
21
88
7
67
6
6
4
82
0.95
15768168--15768211
8
5.4
8
82
12
54
75
9
2
13
1.14
15774491--15774524
16
2.1
17
88
5
52
52
2
0
44
1.16
15775895--15775919
7
3.6
7
100
0
50
12
0
0
88
0.53
15775951--15775984
11
2.9
12
82
8
52
73
5
5
14
1.21
15776911--15776984
5
13.6
5
74
20
60
72
4
2
20
1.13
15776912--15776979
26
2.7
26
86
11
88
73
4
2
19
1.13
15782088--15782120
2
16.5
2
93
0
57
48
3
0
48
1.17
15785432--15785665
77
3.0
77
94
1
398
28
17
26
26
1.98
15786105--15786145
14
2.7
15
88
7
57
34
0
2
63
1.08
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15786102--15786145
15
2.9
16
86
10
56
36
0
2
61
1.09
15791420--15791471
3
17.3
3
91
0
59
1
7
34
55
1.39
15792837--15792867
16
1.9
16
93
0
53
48
0
3
48
1.17
15792980--15793028
25
2.0
25
84
7
66
38
0
12
48
1.41
15792984--15793028
21
2.2
20
88
11
65
37
0
13
48
1.42
15793110--15793178
22
3.0
22
69
12
57
47
7
5
39
1.55
15794035--15794075
11
3.5
12
81
12
50
46
4
2
46
1.37
15794105--15794158
26
2.0
26
85
3
72
66
0
5
27
1.13
15795040--15795080
2
20.0
2
95
5
73
48
2
0
48
1.14
15800431--15800459
14
2.1
14
100
0
58
44
6
0
48
1.29
15800725--15800765
15
2.8
14
88
7
55
48
0
2
48
1.14
15801026--15801077
25
2.1
25
85
0
68
50
3
0
46
1.20
15810168--15810228
29
2.1
30
84
9
81
31
4
0
63
1.15
15810166--15810228
13
4.5
14
73
16
51
31
4
0
63
1.15
15813164--15813196
15
2.1
16
94
5
59
0
27
0
72
0.85
15816386--15816418
2
16.5
2
93
0
57
45
0
3
51
1.16
15816935--15816959
10
2.5
10
100
0
50
20
8
28
44
1.79
15821020--15821125
52
2.0
52
83
3
133
33
12
9
45
1.74
15821823--15821883
22
2.9
21
78
9
70
73
3
0
22
0.97
15822489--15822547
19
3.1
19
82
9
66
57
1
6
33
1.35
15822578--15822617
17
2.4
17
87
8
55
75
0
2
22
0.93
15822869--15822929
32
1.9
32
89
0
95
45
8
19
26
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15822951--15823018
35
1.9
35
87
0
100
45
11
17
25
1.82
15823103--15823407
32
9.4
32
72
9
172
51
11
19
17
1.75
15823088--15823243
65
2.4
64
76
10
174
51
10
18
18
1.74
15823270--15823341
34
2.1
34
84
5
92
54
11
19
15
1.70
15824427--15824465
18
2.2
18
86
9
53
7
17
0
74
1.05
15829308--15829390
38
2.2
38
80
8
98
72
6
1
20
1.13
15829331--15829401
11
6.4
11
71
22
51
76
4
1
18
1.03
15830015--15830055
19
2.2
19
86
0
55
63
4
4
26
1.35
15830023--15830061
19
2.1
19
90
0
60
64
0
5
30
1.15
15832464--15832629
57
2.8
60
78
9
202
56
7
10
25
1.59

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120