Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167904.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_17, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21107920

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   

This is table  98  of  121  ( 14423 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16708562--16708765
43
4.7
43
80
5
205
28
11
14
44
1.81
16714269--16714304
2
18.0
2
100
0
72
50
0
0
50
1.00
16724487--16724521
3
11.7
3
87
0
52
65
0
34
0
0.93
16724684--16724864
26
6.5
26
69
18
91
64
6
14
15
1.48
16724656--16724864
57
3.6
58
80
9
212
63
5
14
16
1.49
16725711--16725915
8
26.4
8
70
14
63
48
28
3
19
1.66
16725706--16725798
15
6.1
15
77
8
80
48
29
3
19
1.64
16725724--16725781
30
1.9
30
89
6
91
51
25
1
20
1.57
16725771--16725859
40
2.3
38
86
5
117
47
29
5
17
1.71
16725706--16725882
16
11.4
16
72
12
84
46
29
4
19
1.69
16725783--16725853
24
3.0
24
81
4
83
42
32
7
18
1.77
16730653--16730682
12
2.5
12
100
0
60
40
0
0
60
0.97
16730674--16730722
16
3.0
16
82
5
53
51
0
0
48
1.00
16730972--16731017
14
3.2
14
75
6
56
65
2
0
32
1.05
16730958--16731017
29
2.1
29
84
6
77
61
5
0
33
1.17
16732901--16732944
19
2.3
19
88
11
63
65
0
0
34
0.93
16733271--16733304
2
17.0
2
100
0
68
50
0
0
50
1.00
16733615--16733653
16
2.4
16
84
16
53
74
10
12
2
1.17
16733620--16733653
8
4.2
8
89
10
52
76
11
11
0
1.02
16736093--16736137
21
2.1
21
84
12
56
60
0
8
31
1.28
16736093--16736152
27
2.3
26
82
2
75
58
0
8
33
1.28
16736208--16736358
64
2.4
64
90
1
232
53
3
2
40
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16736208--16736395
64
2.9
62
79
14
202
50
5
3
40
1.41
16736976--16737015
20
2.0
21
90
5
64
37
5
2
55
1.35
16741210--16741297
6
15.7
6
79
13
62
29
0
19
51
1.47
16741216--16741270
18
3.2
18
87
5
69
27
0
21
50
1.49
16741222--16741296
16
4.6
16
81
6
78
25
0
22
52
1.48
16741230--16741288
18
3.3
18
87
0
73
22
0
25
52
1.47
16741209--16741297
16
5.7
16
76
5
65
30
0
19
50
1.48
16741348--16741467
6
20.3
6
80
10
95
49
18
0
31
1.54
16741357--16741465
20
5.7
18
73
8
65
49
18
0
31
1.54
16744499--16744530
14
2.1
16
88
11
50
87
6
3
3
0.73
16747646--16747682
2
18.5
2
100
0
74
51
0
0
48
1.00
16753225--16753253
14
2.1
14
100
0
58
41
0
6
51
1.28
16755030--16755059
2
15.0
2
100
0
60
50
0
0
50
1.00
16757623--16757974
130
2.7
129
87
5
469
34
9
6
50
1.61
16757996--16758027
5
6.4
5
92
0
55
65
0
0
34
0.93
16758054--16758085
9
3.6
9
91
0
55
68
6
0
25
1.12
16758825--16758926
16
6.2
16
76
18
68
70
0
1
26
1.04
16758825--16758964
18
7.3
18
76
18
99
71
0
2
25
1.04
16758825--16758913
3
30.3
3
79
15
89
69
0
2
28
1.00
16758842--16758958
9
13.1
9
70
25
65
72
0
2
23
1.02
16759519--16759592
20
3.6
20
78
8
69
56
0
4
39
1.18
16759652--16759728
35
2.4
34
79
16
83
53
0
1
45
1.08
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16759670--16759727
17
3.3
18
76
9
57
51
0
1
46
1.11
16764751--16764806
2
28.0
2
77
0
58
41
0
10
48
1.38
16769080--16769180
43
2.3
43
93
0
175
47
20
5
25
1.73
16772141--16772182
21
2.0
21
100
0
84
47
0
9
42
1.36
16773220--16773275
26
2.1
27
83
9
71
53
17
12
16
1.73
16777965--16778121
52
3.0
52
88
1
208
24
26
9
39
1.86
16778991--16779147
52
3.0
52
87
3
201
26
26
8
38
1.86
16779174--16779202
11
2.6
11
100
0
58
51
27
0
20
1.47
16779695--16779918
57
3.8
59
82
15
261
33
12
8
45
1.73
16780360--16780405
20
2.3
20
81
3
58
26
19
26
28
1.99
16780457--16780527
31
2.3
31
87
4
99
23
21
23
30
1.99
16781972--16782010
21
1.9
20
84
5
51
64
7
5
23
1.40
16782533--16782604
35
2.0
36
89
2
110
27
11
9
51
1.69
16782987--16783054
17
4.0
17
71
19
61
27
0
1
70
0.96
16784765--16784793
2
14.5
2
100
0
58
51
0
0
48
1.00
16784926--16784960
17
2.1
17
88
0
52
28
0
11
60
1.32
16785869--16785905
19
1.9
19
94
0
65
29
16
0
54
1.43
16792248--16793196
515
1.8
514
92
0
1605
35
11
14
38
1.82
16799059--16799092
15
2.3
15
94
0
59
41
8
5
44
1.60
16799301--16799343
14
3.1
14
73
6
52
27
0
0
72
0.85
16799533--16799587
8
6.8
8
79
4
65
80
0
5
14
0.89
16799539--16799586
17
2.7
18
77
3
53
81
0
6
12
0.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16800142--16800432
59
5.0
58
76
14
246
48
5
9
36
1.59
16800142--16800433
116
2.5
118
76
11
296
48
5
9
35
1.59
16804058--16804105
24
2.0
24
91
0
78
70
0
22
6
1.09
16804463--16804513
17
3.3
15
78
13
59
78
0
17
3
0.90
16804453--16804539
26
3.5
26
77
15
101
74
0
19
5
1.01
16804513--16804543
15
2.1
14
94
5
53
64
0
25
9
1.24
16805629--16805669
21
2.0
21
90
0
64
34
14
14
36
1.87
16805845--16805892
15
3.1
15
76
5
51
47
4
14
33
1.63
16806033--16806383
43
8.3
42
82
8
367
25
12
17
44
1.84
16806039--16806395
42
8.3
43
81
8
374
25
12
17
44
1.83
16806030--16806395
129
2.8
127
79
11
424
25
12
17
44
1.84
16806396--16806425
15
1.9
16
93
6
53
86
13
0
0
0.57
16807048--16807088
21
2.0
21
90
0
64
68
0
31
0
0.90
16807443--16807617
58
2.9
58
80
9
201
50
5
8
36
1.54
16815122--16815372
125
2.0
121
95
3
448
36
7
13
41
1.74
16816290--16816340
22
2.5
21
90
9
79
50
0
0
49
1.00
16816289--16816340
20
2.6
21
85
14
74
51
0
0
48
1.00
16819049--16819092
22
2.0
23
90
4
72
45
0
0
54
0.99
16819738--16819787
18
3.1
17
86
11
61
56
0
0
44
0.99
16819801--16819838
19
2.1
19
85
5
51
68
2
2
26
1.16
16819886--16819911
6
4.3
6
100
0
52
46
34
19
0
1.50
16820244--16820305
28
2.1
30
82
11
76
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16832112--16832170
29
2.0
30
93
3
102
38
10
6
44
1.65
16833428--16833480
22
2.5
22
81
9
65
50
0
5
43
1.25
16834927--16835073
66
2.2
66
97
0
276
36
8
14
40
1.77
16835244--16835284
18
2.2
19
91
4
66
26
2
12
58
1.46
16835446--16835470
10
2.5
10
100
0
50
92
0
0
8
0.40
16836318--16836357
17
2.5
17
88
11
59
87
2
10
0
0.63
16836318--16836356
20
2.0
20
90
10
62
87
2
10
0
0.65
16836569--16836790
117
1.9
118
81
3
268
41
16
24
16
1.89
16836882--16837183
120
2.5
120
75
4
286
44
12
21
21
1.86
16844680--16844710
14
2.1
15
94
5
55
6
25
6
61
1.45
16849447--16849481
3
11.7
3
100
0
70
34
0
0
65
0.93
16850604--16850660
30
1.9
29
82
3
69
52
7
7
33
1.55
16853075--16853100
3
8.7
3
100
0
52
0
30
0
69
0.89
16853669--16853711
18
2.3
19
88
4
61
41
0
0
58
0.98
16855590--16855623
17
2.0
17
88
11
52
35
11
0
52
1.38
16858658--16858708
25
2.0
25
88
0
75
35
1
11
50
1.50
16858687--16858732
16
2.8
17
78
15
51
45
0
4
50
1.21
16858958--16859102
62
2.3
63
82
5
170
40
3
16
40
1.65
16860820--16860872
21
2.6
22
74
14
60
26
7
1
64
1.31
16864269--16864318
14
3.5
14
81
5
64
86
8
4
2
0.78
16864269--16864318
18
2.8
17
82
14
57
86
8
4
2
0.78
16866286--16866344
22
2.7
21
80
12
64
74
6
3
15
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16866736--16866796
21
2.9
22
71
9
56
45
24
6
22
1.76
16867199--16867278
3
26.7
3
94
0
142
67
0
1
31
0.99
16867562--16867668
54
2.0
54
83
0
133
42
10
20
26
1.84
16867820--16868016
61
3.2
61
80
11
183
40
13
24
21
1.90
16872905--16873067
3
59.0
3
72
18
113
34
1
3
60
1.22
16873958--16874005
4
11.8
4
78
12
53
18
0
4
77
0.93
16881457--16881522
17
4.2
16
76
20
52
77
1
6
15
1.04
16881431--16881510
25
3.3
22
76
13
52
76
2
5
16
1.07
16881432--16881525
38
2.3
41
84
10
115
76
2
6
14
1.08
16881475--16881530
22
2.6
22
83
8
62
80
0
8
10
0.91

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121