Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167904.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_17, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21107920

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   

This is table  58  of  121  ( 14423 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9945228--9945266
12
3.0
12
80
20
51
58
0
0
41
0.98
9945228--9945265
15
2.8
13
85
14
51
60
0
0
39
0.97
9948221--9948261
18
2.2
19
95
4
75
41
17
14
26
1.88
9949495--9949539
24
2.0
23
87
12
67
51
11
15
22
1.75
9950558--9950606
25
2.0
25
83
0
62
46
22
8
22
1.77
9959926--9959979
27
2.0
27
88
0
81
46
7
25
20
1.77
9963880--9963924
23
2.0
23
100
0
90
26
13
28
31
1.94
9963880--9963941
23
2.7
23
89
0
79
30
12
25
30
1.93
9964685--9964874
56
3.4
56
75
1
175
22
26
15
35
1.94
9970740--9971257
267
1.9
268
88
1
779
34
17
10
37
1.84
9973163--9973845
362
1.9
356
84
3
911
45
13
16
23
1.83
9974575--9974625
25
2.0
27
84
7
70
52
5
15
25
1.65
9977752--9977785
12
2.6
14
86
13
54
55
0
0
44
0.99
9989477--9989517
21
2.0
21
85
0
55
4
2
14
78
1.03
9990363--9990408
20
2.2
21
84
7
67
58
2
28
10
1.43
9995203--9995240
16
2.3
17
95
4
69
36
23
21
18
1.95
9995911--9995956
8
5.6
8
97
2
83
76
10
0
13
1.03
9995945--9995986
6
6.8
6
84
10
50
80
2
2
14
0.90
9996445--9996592
52
2.8
53
83
5
187
37
18
8
35
1.80
9997057--9997362
86
3.6
86
82
1
364
36
14
18
30
1.90
10002360--10002413
8
7.7
7
86
10
51
75
1
1
20
0.98
10002324--10002421
6
15.7
6
74
19
69
74
3
4
18
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10002329--10002421
32
2.9
32
74
17
77
74
3
4
18
1.12
10003616--10003657
22
1.9
22
90
9
68
47
21
0
30
1.51
10008160--10008230
29
2.4
30
83
6
83
38
5
1
54
1.33
10008284--10008338
23
2.4
23
84
6
67
43
5
10
40
1.63
10009665--10009742
38
2.1
38
85
4
104
55
7
11
25
1.62
10010332--10010373
17
2.6
16
81
7
57
47
16
7
28
1.73
10012577--10012856
140
2.0
144
90
3
442
51
7
9
32
1.62
10013106--10013143
11
3.5
11
79
13
51
60
0
7
31
1.25
10014001--10014038
19
2.0
19
100
0
76
47
15
15
21
1.82
10014936--10014976
16
2.6
16
92
7
66
41
12
0
46
1.41
10015100--10015151
20
2.5
19
82
14
59
50
1
5
42
1.37
10015161--10015200
10
4.2
10
81
12
57
50
2
10
37
1.50
10015163--10015200
18
2.1
18
95
0
67
50
2
10
36
1.51
10018984--10019371
57
6.7
57
85
6
480
38
13
6
41
1.71
10018984--10019371
116
3.4
113
87
6
539
38
13
6
41
1.71
10019391--10019437
5
8.8
5
95
4
67
82
0
0
17
0.66
10019392--10019490
23
4.4
23
67
17
66
69
3
2
25
1.13
10021552--10022020
45
11.0
41
82
7
397
42
19
14
23
1.89
10021552--10021924
130
2.9
128
87
5
500
42
18
15
23
1.88
10021617--10022021
41
9.7
41
81
6
174
41
19
15
23
1.89
10021617--10022040
80
5.1
78
78
10
275
42
19
14
23
1.87
10022350--10022431
43
1.9
42
82
7
103
35
17
10
36
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10023074--10023197
63
2.0
63
85
0
167
32
20
7
39
1.80
10023890--10023926
8
4.8
8
93
6
67
10
10
0
78
0.97
10023891--10023925
15
2.3
15
100
0
70
11
11
0
77
1.00
10027953--10028226
116
2.3
117
88
6
405
37
11
6
44
1.65
10027954--10028229
58
4.7
57
85
6
351
38
11
6
44
1.65
10028242--10028291
5
9.4
5
83
16
57
82
0
2
16
0.77
10028242--10028297
6
10.0
6
78
18
59
80
1
1
16
0.88
10028242--10028288
11
4.3
11
86
7
69
82
0
2
14
0.75
10028242--10028288
16
2.9
16
87
12
69
82
0
2
14
0.75
10028323--10028369
3
14.7
3
91
4
58
70
2
0
27
0.99
10028319--10028375
18
3.1
19
82
14
75
70
1
0
28
0.98
10028314--10028371
14
3.8
15
74
24
50
67
3
0
29
1.07
10030153--10030212
23
2.6
22
76
10
59
75
3
3
18
1.09
10031323--10031375
13
4.4
13
71
23
53
56
15
0
28
1.39
10031366--10031405
19
2.2
18
86
4
53
55
7
5
32
1.50
10031588--10031623
18
2.0
18
88
0
54
55
11
5
27
1.57
10033198--10033240
12
3.7
12
82
11
54
65
9
0
25
1.22
10033267--10033300
17
2.0
17
88
0
50
67
11
0
20
1.21
10033674--10033722
11
4.4
11
80
12
55
77
2
16
4
1.01
10037460--10037977
262
2.0
260
96
2
950
32
14
15
37
1.88
10042069--10042160
31
2.9
33
90
9
163
38
2
0
59
1.09
10042069--10042174
31
3.5
31
89
7
155
37
1
0
59
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10042167--10042203
14
2.7
14
91
4
58
48
0
2
48
1.15
10043408--10043438
2
15.5
2
100
0
62
51
0
0
48
1.00
10047655--10047693
2
19.5
2
100
0
78
51
0
0
48
1.00
10051654--10052608
321
3.0
320
89
2
1349
40
9
8
41
1.69
10056280--10056335
25
2.2
25
90
0
85
44
12
5
37
1.65
10062072--10062117
3
15.3
3
100
0
92
32
0
0
67
0.91
10070450--10070492
22
2.0
22
90
0
68
83
2
6
6
0.88
10071477--10071568
43
2.1
44
86
6
125
32
13
10
43
1.78
10071782--10071876
19
5.2
17
76
12
66
28
14
9
47
1.76
10071869--10071914
17
2.5
20
86
10
62
34
10
6
47
1.64
10071956--10072003
17
2.7
18
87
9
71
22
12
12
52
1.73
10071769--10072027
36
7.1
36
72
11
152
29
12
10
47
1.75
10071793--10072003
19
11.5
19
72
12
138
28
12
10
48
1.74
10072160--10072196
17
2.2
16
95
4
65
27
24
16
32
1.96
10072087--10072257
87
2.0
86
84
3
227
30
16
14
38
1.88
10072143--10072266
17
7.1
17
70
14
58
29
14
16
39
1.89
10072130--10072307
86
2.0
87
82
12
215
30
15
15
38
1.89
10072511--10072557
23
2.1
22
88
4
67
38
6
6
48
1.54
10072521--10072559
7
5.3
7
82
11
51
38
5
2
53
1.37
10072521--10072561
15
2.7
15
80
0
55
39
4
2
53
1.35
10074098--10074166
21
3.4
21
69
25
58
49
4
0
46
1.21
10076157--10076208
26
2.0
26
88
0
77
30
25
15
28
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10078826--10078878
26
2.0
26
96
0
97
26
24
20
28
1.99
10079715--10079765
26
2.0
26
96
0
93
29
23
17
29
1.97
10080595--10080647
26
2.0
26
96
0
97
26
24
20
28
1.99
10081486--10081538
26
2.0
26
92
0
88
28
22
20
28
1.99
10082385--10082437
26
2.0
26
88
0
79
30
22
18
28
1.98
10083296--10083348
26
2.0
26
92
0
88
28
22
20
28
1.99
10074618--10095028
899
22.9
899
85
3
25644
26
24
23
25
2.00
10084196--10084248
26
2.0
26
96
0
97
28
22
18
30
1.98
10085954--10086006
26
2.0
26
92
0
88
28
24
18
28
1.98
10086846--10086896
26
2.0
26
96
0
93
29
23
17
29
1.97
10087727--10087779
26
2.0
26
92
0
88
28
24
18
28
1.98
10088625--10088677
26
2.0
26
92
0
88
28
24
18
28
1.98
10090393--10090445
26
2.0
26
92
0
88
26
20
18
33
1.96
10092195--10092247
26
2.0
26
96
0
97
26
24
20
28
1.99
10092985--10093016
12
2.7
12
100
0
64
25
18
40
15
1.90
10093108--10093160
26
2.0
26
96
0
97
26
24
20
28
1.99
10093998--10094047
26
1.9
26
100
0
100
24
26
22
28
1.99
10096073--10096302
114
2.0
114
93
0
397
20
30
26
23
1.98
10096288--10096338
26
2.0
26
100
0
102
27
23
19
29
1.98
10097171--10097221
26
2.0
26
92
0
84
27
25
15
31
1.96
10097496--10097548
26
2.0
26
88
0
79
26
24
20
28
1.99
10098380--10098433
26
2.1
26
89
0
81
27
22
20
29
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10099067--10099091
12
2.1
12
100
0
50
0
56
28
16
1.41
10099269--10099327
26
2.3
26
91
5
95
27
25
20
27
1.99
10101016--10101068
26
2.0
26
89
7
81
26
24
18
30
1.98
10103634--10103686
26
2.0
26
100
0
106
26
26
20
26
1.99
10105208--10105258
26
2.0
26
100
0
102
27
25
19
27
1.99
10104213--10105642
712
2.0
712
89
1
2222
22
26
25
25
2.00
10106108--10106160
26
2.0
26
88
0
79
28
22
18
30
1.98
10107006--10107058
26
2.0
26
92
0
88
26
26
20
26
1.99
10108612--10108664
26
2.0
26
88
0
79
30
22
20
26
1.98
10107782--10114379
904
7.4
899
82
6
7292
25
24
23
25
2.00

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121