Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167871.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_14, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22631831

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   

This is table  21  of  125  ( 14885 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3684058--3684087
2
15.0
2
92
0
51
46
0
3
50
1.18
3688831--3688888
20
2.9
20
73
16
66
22
3
3
70
1.17
3691262--3691421
62
2.7
57
84
10
196
43
6
15
35
1.73
3691758--3691920
80
2.0
80
98
0
317
36
19
18
25
1.94
3696459--3696486
11
2.5
11
100
0
56
50
7
0
42
1.30
3697700--3697755
20
2.8
20
75
0
58
26
39
12
21
1.89
3699367--3699397
15
2.1
15
94
5
55
29
0
0
70
0.87
3702891--3702962
2
36.5
2
80
8
85
44
1
4
50
1.30
3704825--3704863
14
2.7
14
88
7
53
35
0
10
53
1.35
3705403--3705509
16
6.9
16
71
14
64
46
30
2
19
1.64
3705403--3705469
24
2.8
24
86
0
98
46
26
4
22
1.71
3708466--3708575
4
28.0
4
75
17
72
70
1
1
25
1.06
3708739--3708787
3
16.3
3
95
0
89
65
0
0
34
0.93
3709395--3709453
18
3.3
18
79
9
59
57
0
0
42
0.98
3710163--3710187
4
6.2
4
100
0
50
24
0
0
76
0.80
3717569--3717624
26
2.1
27
84
12
73
33
8
3
53
1.49
3717995--3718045
25
2.0
26
84
3
68
58
0
0
41
0.98
3718603--3718698
26
3.8
25
75
6
79
44
0
2
53
1.12
3718595--3718657
24
2.6
25
80
7
76
38
1
1
58
1.17
3719695--3719734
19
2.2
17
86
8
53
62
0
7
30
1.23
3719695--3719735
18
2.2
19
86
4
57
63
0
7
29
1.21
3719999--3720025
13
2.1
13
100
0
54
62
0
14
22
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3720244--3720268
7
3.6
7
100
0
50
88
0
0
12
0.53
3720266--3720293
7
4.0
7
100
0
56
42
14
28
14
1.84
3725563--3725631
32
2.2
31
80
15
79
43
0
2
53
1.15
3729225--3729333
41
2.7
40
77
16
116
44
1
0
53
1.11
3729224--3729331
15
6.8
15
66
25
53
45
1
0
52
1.11
3729257--3729348
23
3.9
23
76
13
73
40
1
0
58
1.05
3730438--3730466
2
14.5
2
100
0
58
48
0
51
0
1.00
3745549--3745587
6
6.5
6
85
11
53
87
10
0
2
0.65
3745546--3745583
17
2.2
18
90
4
60
89
7
0
2
0.57
3751634--3751702
29
2.4
29
87
2
95
37
10
13
39
1.78
3753946--3754003
14
4.4
13
76
10
55
51
0
0
48
1.00
3755198--3755241
14
3.1
14
78
9
54
61
0
0
38
0.96
3755567--3755613
22
2.1
22
84
7
60
29
0
8
61
1.25
3757207--3757238
11
2.8
11
95
4
55
87
12
0
0
0.54
3757289--3757346
21
2.7
20
86
10
71
29
53
6
10
1.61
3757540--3757577
17
2.2
17
90
0
58
78
10
7
2
1.04
3757546--3757589
22
2.0
22
86
8
63
84
11
4
0
0.77
3758929--3759303
194
1.9
196
93
2
657
36
10
15
38
1.81
3759767--3759813
14
3.4
13
81
16
58
85
8
2
4
0.81
3768090--3768508
49
8.6
49
87
5
550
26
11
25
36
1.90
3768090--3768508
96
4.3
97
86
6
555
26
11
25
36
1.90
3768675--3768714
8
4.9
8
87
3
53
87
10
0
2
0.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3768675--3768719
16
2.7
17
82
6
65
86
11
0
2
0.65
3768768--3768834
35
1.9
35
96
0
125
26
47
10
14
1.77
3768765--3768844
35
2.3
34
87
6
124
26
50
10
13
1.73
3769039--3769094
24
2.4
23
87
3
76
78
10
7
3
1.06
3770412--3770791
194
2.0
194
92
3
640
37
11
14
37
1.81
3771295--3771320
2
13.0
2
100
0
52
50
0
0
50
1.00
3774101--3774133
3
11.0
3
100
0
66
66
0
0
33
0.92
3775815--3775865
21
2.4
21
93
0
84
58
0
1
39
1.09
3776498--3776527
15
2.1
15
93
6
53
40
0
0
60
0.97
3789800--3789871
33
2.3
30
86
13
117
40
2
29
27
1.70
3789805--3789868
33
1.9
33
100
0
128
39
3
28
29
1.72
3790405--3790471
27
2.5
27
83
7
75
58
1
7
32
1.35
3791559--3792091
233
2.3
228
80
9
558
40
13
13
33
1.83
3794367--3794408
2
21.0
2
100
0
84
50
0
50
0
1.00
3796020--3796049
1
30.0
1
100
0
60
100
0
0
0
0.00
3799126--3799165
20
2.0
20
85
0
53
42
0
0
57
0.98
3799157--3799202
20
2.3
20
84
0
56
60
2
4
32
1.28
3806237--3806296
29
2.0
29
87
6
84
55
0
0
45
0.99
3806239--3806309
29
2.4
29
80
4
79
56
1
1
40
1.17
3808766--3808821
9
6.1
9
78
12
51
71
8
0
19
1.12
3808766--3808821
18
3.1
18
86
2
76
71
8
0
19
1.12
3809323--3809435
51
2.2
50
90
0
154
28
15
18
38
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3815218--3815265
22
2.2
22
85
7
62
45
4
8
41
1.53
3823197--3823228
2
16.0
2
100
0
64
0
50
0
50
1.00
3831645--3831687
20
2.2
20
86
0
59
27
4
11
55
1.55
3831760--3831792
14
2.3
15
94
5
59
75
6
0
18
1.00
3831803--3831850
19
2.6
19
90
3
71
81
2
4
12
0.93
3832542--3832571
2
15.0
2
100
0
60
50
0
0
50
1.00
3833034--3833071
20
1.9
20
88
0
58
47
0
2
50
1.15
3833065--3833110
8
5.8
8
81
0
56
58
0
0
41
0.98
3833067--3833127
12
5.1
13
78
11
60
59
0
0
40
0.98
3833065--3833118
24
2.2
24
86
0
72
59
0
0
40
0.98
3833436--3833482
21
2.2
21
92
0
76
55
0
0
44
0.99
3833971--3833997
2
13.5
2
100
0
54
0
48
0
51
1.00
3838921--3838965
22
2.1
21
87
4
63
57
0
2
40
1.11
3847212--3847257
20
2.4
19
82
7
56
28
2
0
69
1.00
3847226--3847274
24
2.0
24
88
0
71
34
2
0
63
1.06
3852376--3852480
54
1.9
54
82
3
131
30
25
23
20
1.98
3865755--3865803
2
25.5
2
79
8
57
44
0
0
55
0.99
3865748--3865803
15
3.8
15
80
4
69
44
0
1
53
1.11
3866136--3866164
13
2.1
14
93
6
51
44
0
0
55
0.99
3868885--3868933
20
2.5
19
80
6
71
40
0
2
57
1.10
3869425--3869483
25
2.4
24
83
5
73
35
15
1
47
1.55
3870565--3870677
27
4.0
29
72
18
80
46
0
0
53
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3870591--3870665
29
2.9
24
70
21
62
49
0
0
50
1.00
3870589--3870687
27
3.7
27
72
18
73
51
0
0
48
1.00
3870629--3870709
39
2.1
39
84
13
105
55
0
0
44
0.99
3871042--3871092
3
17.0
3
100
0
102
66
0
0
33
0.92
3871229--3871268
22
1.9
19
85
14
53
47
0
2
50
1.14
3871235--3871328
29
3.2
28
76
16
77
56
1
1
41
1.13
3871606--3871645
17
2.4
17
91
8
64
62
0
0
37
0.95
3871610--3871652
16
2.6
16
79
17
52
60
0
0
39
0.97
3872129--3872187
19
3.1
19
78
4
64
69
3
0
27
1.04
3872160--3872224
26
2.5
28
80
12
75
72
1
0
26
0.94
3872872--3872953
25
3.2
25
73
13
76
48
0
1
50
1.08
3872931--3873001
24
3.0
24
68
10
56
38
1
0
60
1.06
3872965--3873012
16
3.2
16
77
17
57
31
4
0
64
1.12
3875516--3875689
86
2.0
87
97
1
332
25
18
29
26
1.98
3876149--3876184
17
2.1
17
94
0
63
47
2
0
50
1.15
3876701--3876741
21
1.9
21
85
5
55
34
0
4
60
1.18
3877431--3877466
5
7.2
5
93
0
63
77
0
22
0
0.76
3883696--3883747
19
2.6
20
82
14
63
34
1
1
61
1.18
3891512--3891542
1
31.0
1
100
0
62
100
0
0
0
0.00
3893604--3893750
75
1.9
76
91
4
244
30
19
17
32
1.95
3894278--3894326
19
2.6
19
100
0
98
16
12
6
65
1.45
3894690--3894737
24
2.0
25
83
4
62
66
2
6
25
1.26
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3896878--3896912
14
2.5
14
100
0
70
31
17
22
28
1.96
3903806--3903847
22
1.9
22
85
0
57
52
0
2
45
1.13
3903837--3903928
37
2.5
37
77
17
104
44
2
3
50
1.30
3904792--3904837
20
2.3
20
88
7
67
63
0
4
32
1.14
3905185--3905253
13
5.4
13
73
19
56
63
1
1
33
1.12
3905258--3905308
22
2.3
22
80
6
59
58
0
0
41
0.98
3907359--3907400
21
2.0
21
95
0
75
50
0
30
19
1.48
3907714--3907742
10
2.9
10
100
0
58
17
51
0
31
1.45
3910239--3910279
20
2.0
20
100
0
82
36
9
14
39
1.79
3910957--3911021
34
1.9
34
81
6
78
21
16
15
46
1.84

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125