Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167871.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_14, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22631831

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   

This is table  66  of  125  ( 14885 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13085121--13085332
57
3.7
55
80
12
232
41
7
15
36
1.75
13088486--13088521
15
2.4
15
90
0
54
22
27
5
44
1.75
13095154--13095188
15
2.3
15
95
0
61
31
8
0
60
1.27
13096148--13096195
23
2.1
23
84
0
60
66
6
2
25
1.26
13096212--13096255
15
3.0
14
78
12
52
70
2
0
27
0.99
13096587--13096634
11
4.6
11
75
15
57
50
16
0
33
1.46
13097106--13097160
3
18.3
3
100
0
110
34
0
32
32
1.58
13097159--13097269
3
38.0
3
72
16
74
62
3
3
30
1.29
13097754--13097975
85
2.6
85
84
1
257
33
14
19
32
1.92
13099099--13099137
16
2.4
17
83
16
55
0
10
7
82
0.86
13101046--13101083
16
2.4
16
86
8
51
76
2
0
21
0.91
13101045--13101092
24
2.0
23
92
4
78
75
2
0
22
0.91
13101433--13101655
109
2.0
110
85
4
299
56
8
12
22
1.62
13101462--13101657
54
3.6
52
69
13
146
55
9
11
23
1.64
13105636--13105674
13
2.8
14
88
7
53
76
2
0
20
0.90
13105644--13105687
19
2.3
19
96
4
79
79
4
0
15
0.89
13106528--13106552
3
8.3
3
100
0
50
36
0
32
32
1.58
13106551--13106741
3
68.0
3
77
12
156
61
3
4
30
1.32
13106609--13106684
5
14.2
5
81
8
62
60
3
2
32
1.29
13113150--13113179
15
2.1
14
93
6
51
46
0
0
53
1.00
13114990--13115040
12
4.3
12
79
18
54
37
0
0
62
0.95
13118575--13118616
11
3.8
11
84
9
59
64
19
0
16
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13118648--13118687
19
2.0
20
85
4
55
40
37
2
20
1.66
13124403--13124542
63
2.2
62
83
5
165
46
17
21
14
1.84
13127569--13127610
21
2.0
21
100
0
84
47
14
4
33
1.65
13135091--13135158
25
2.8
25
76
12
70
60
7
10
22
1.54
13135740--13135780
5
8.6
5
84
10
59
80
0
0
19
0.71
13138845--13140134
186
6.9
185
82
5
1323
39
11
12
36
1.80
13138856--13140134
372
3.4
369
82
4
1474
39
11
12
36
1.80
13139641--13140096
62
7.4
62
66
13
177
38
11
12
36
1.80
13145313--13145359
21
2.2
22
92
7
80
25
4
0
70
1.05
13147199--13147254
21
2.6
21
80
2
67
44
7
30
17
1.76
13147868--13147952
34
2.5
34
80
0
98
45
16
11
25
1.81
13148007--13148159
34
4.5
34
68
4
85
38
21
10
29
1.87
13155800--13155870
22
3.2
22
64
9
54
50
4
1
43
1.30
13156474--13156503
15
1.9
16
93
6
53
46
0
36
16
1.47
13156671--13156706
13
2.8
13
87
4
56
22
19
22
36
1.95
13164098--13164133
5
7.4
5
93
6
56
33
2
0
63
1.08
13164080--13164130
24
2.1
24
82
7
59
31
1
1
64
1.15
13164062--13164134
15
4.9
15
74
12
53
27
2
4
65
1.24
13164756--13164797
19
2.2
19
86
0
57
35
14
16
33
1.89
13172300--13172337
20
1.9
20
84
10
51
60
5
18
15
1.53
13173737--13173787
21
2.4
21
93
0
84
29
19
23
27
1.98
13173944--13174331
142
2.7
143
82
6
439
31
11
15
41
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13173880--13174406
144
3.7
141
79
8
449
30
11
15
42
1.83
13174876--13175019
7
22.1
7
68
23
57
42
40
2
14
1.60
13174889--13174951
18
3.5
18
78
8
58
44
38
3
14
1.61
13174834--13175018
12
14.8
12
69
19
87
41
40
2
16
1.62
13175057--13175103
15
2.9
15
75
24
51
44
29
0
25
1.54
13175085--13175128
19
2.3
19
88
0
70
40
43
0
15
1.47
13175057--13175122
26
2.5
26
87
4
89
43
34
0
21
1.53
13175207--13175272
5
13.0
5
75
3
60
54
39
3
3
1.31
13175213--13175271
20
2.9
20
87
9
84
54
38
3
3
1.34
13176191--13176279
32
2.8
32
77
6
99
19
26
11
42
1.84
13176313--13176544
33
7.0
32
79
6
198
27
20
11
40
1.87
13176335--13176544
66
3.2
65
79
5
226
26
20
11
41
1.86
13176313--13176544
99
2.3
99
81
7
258
27
20
11
40
1.87
13176528--13176590
32
1.9
32
87
6
90
23
26
7
41
1.82
13176831--13176925
5
18.8
5
73
10
50
23
6
1
69
1.17
13177495--13177531
19
2.0
19
89
5
58
29
13
13
43
1.82
13177747--13177786
21
1.9
21
89
0
62
40
0
2
57
1.12
13177917--13178086
93
1.8
93
81
9
213
44
8
5
40
1.60
13188135--13188169
18
1.9
18
88
0
52
17
14
0
68
1.21
13188135--13188181
18
2.6
18
83
6
51
19
12
0
68
1.21
13191078--13191134
23
2.5
22
85
5
69
10
1
7
80
0.96
13191098--13191143
7
5.9
8
90
7
60
13
0
4
82
0.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13191095--13191134
7
5.4
7
91
8
62
12
0
2
85
0.71
13191095--13191149
8
7.0
8
87
6
69
10
1
3
83
0.84
13191146--13191183
6
6.7
6
90
6
53
0
2
23
73
0.95
13191140--13191183
12
3.8
12
85
8
56
0
4
20
75
0.98
13192412--13192478
29
2.3
30
82
10
77
13
5
1
79
0.99
13192417--13192479
9
6.8
9
77
13
65
11
4
1
82
0.88
13203154--13203196
9
4.8
9
85
0
50
32
6
2
58
1.38
13203134--13203186
3
17.7
3
92
0
79
28
1
3
66
1.20
13209065--13209091
2
13.5
2
100
0
54
48
0
0
51
1.00
13210753--13210788
17
2.2
16
90
5
54
77
0
8
13
0.98
13210765--13210894
68
1.9
70
88
6
203
46
13
6
32
1.70
13215677--13215722
14
3.4
14
74
17
51
52
6
6
34
1.53
13216213--13216683
59
7.9
58
81
9
499
35
12
6
45
1.67
13216214--13216696
179
2.7
174
84
7
589
36
12
5
45
1.65
13216655--13216710
16
3.4
16
92
2
85
46
0
1
51
1.11
13216595--13216748
76
2.0
77
87
3
222
39
7
4
48
1.53
13216761--13216817
30
1.9
30
85
7
80
75
1
7
15
1.10
13216780--13216857
6
13.7
6
71
15
58
78
1
6
14
1.01
13216762--13216857
17
5.6
17
75
8
79
77
2
6
14
1.06
13216772--13216935
22
7.6
21
69
16
70
75
3
4
17
1.12
13216762--13216858
35
2.8
32
77
13
88
76
2
7
14
1.09
13216884--13216915
4
8.0
4
92
0
55
75
3
0
21
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13216884--13216914
16
1.9
16
100
0
62
77
3
0
19
0.90
13217394--13217431
19
2.0
19
89
0
58
39
21
13
26
1.89
13217763--13217820
22
2.8
20
80
19
59
67
5
5
22
1.31
13217728--13217843
44
2.7
42
80
8
108
67
6
6
19
1.36
13217728--13217839
21
5.2
20
71
20
75
66
7
6
20
1.39
13217950--13218007
6
9.2
6
78
14
55
77
3
1
17
0.99
13218174--13218220
8
5.6
8
80
9
58
2
2
8
87
0.71
13218174--13218211
18
2.1
18
95
0
67
2
0
7
89
0.57
13218228--13218382
42
3.7
41
84
2
184
36
22
16
24
1.94
13218358--13218421
27
2.4
27
97
0
119
31
28
17
23
1.97
13218385--13218670
81
3.5
79
86
6
351
35
23
16
24
1.95
13218385--13218670
41
7.0
41
87
5
368
35
23
16
24
1.95
13219900--13219941
12
3.8
11
81
12
50
4
16
0
78
0.91
13219886--13219973
32
2.8
32
79
8
92
7
20
0
71
1.10
13219886--13219960
33
2.2
32
81
11
87
6
17
0
76
1.00
13223863--13224262
59
6.7
60
82
7
426
35
11
6
46
1.66
13224187--13224226
16
2.4
17
83
8
55
45
0
5
50
1.23
13224277--13224424
12
12.6
12
71
19
52
72
4
4
18
1.16
13224277--13224364
25
3.2
28
83
15
89
77
1
4
17
1.00
13224286--13224371
22
4.1
20
78
18
86
77
1
4
16
0.99
13224283--13224372
17
5.5
17
76
11
98
77
1
4
16
0.98
13224283--13224372
6
15.3
6
74
16
73
77
1
4
16
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13224286--13224371
42
2.0
42
82
8
104
77
1
4
16
0.99
13224283--13224364
31
2.5
31
86
9
103
78
1
3
17
0.97
13224277--13224386
17
6.8
16
75
14
91
75
0
5
18
1.04
13224395--13224429
4
8.8
4
87
0
52
74
5
0
20
1.02
13224395--13224429
12
2.9
12
95
0
61
74
5
0
20
1.02
13225251--13225279
12
2.4
12
100
0
58
79
13
0
6
0.93
13225475--13225528
6
9.2
6
77
18
60
79
1
1
16
0.91
13225475--13225535
17
3.5
16
79
16
68
78
1
3
16
0.96
13225668--13225753
45
1.9
45
90
0
136
44
6
4
44
1.52
13226522--13226566
21
2.1
21
100
0
90
40
17
4
37
1.70

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125