Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167838.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_11, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23775123

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   

This is table  110  of  129  ( 15449 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19851979--19852037
29
2.1
28
81
9
66
32
0
5
62
1.17
19854569--19854817
132
1.9
132
83
1
320
37
10
6
45
1.65
19857059--19857107
17
2.9
16
79
8
62
77
8
6
8
1.12
19857048--19857106
9
6.8
9
72
14
52
77
8
3
10
1.08
19867117--19867141
3
8.3
3
100
0
50
32
0
0
68
0.90
19868237--19868286
24
2.1
24
85
7
66
66
6
0
28
1.15
19870405--19870552
74
2.0
74
90
2
235
37
16
18
27
1.93
19872103--19872146
17
2.4
19
81
11
56
54
2
25
18
1.55
19879753--19879809
8
6.3
9
80
10
55
78
0
8
12
0.95
19879755--19879806
16
3.1
16
86
5
68
84
0
5
9
0.77
19879755--19879806
25
2.1
25
85
7
70
84
0
5
9
0.77
19880591--19880841
48
5.2
48
78
5
238
28
11
19
40
1.86
19880591--19881241
97
7.0
96
77
11
456
27
11
20
40
1.86
19880822--19880870
15
3.3
15
77
2
55
26
8
18
46
1.76
19880764--19880919
78
2.0
78
97
0
294
25
8
22
42
1.82
19880721--19880969
127
2.0
127
84
1
329
27
10
20
42
1.84
19880848--19881241
47
8.2
48
82
5
458
27
11
21
40
1.87
19880900--19881347
95
4.7
95
79
8
231
28
12
18
40
1.86
19880998--19881286
143
2.0
141
80
10
333
26
12
19
40
1.88
19881516--19881564
9
5.2
9
78
9
53
14
4
0
81
0.83
19881516--19881572
29
2.0
29
96
0
105
12
7
0
80
0.89
19886410--19886443
10
3.5
10
88
8
52
88
0
8
2
0.62
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19886411--19886443
9
3.6
9
95
4
57
87
0
9
3
0.63
19887241--19888013
51
15.4
51
77
9
628
32
12
15
39
1.85
19887249--19888048
100
8.0
101
78
8
658
32
12
15
39
1.85
19887241--19888048
151
5.4
150
76
9
607
32
12
15
39
1.85
19887241--19887928
201
3.4
200
78
8
655
32
12
15
38
1.85
19888029--19888068
18
2.2
18
100
0
80
37
10
17
35
1.83
19888029--19888074
18
2.6
18
93
3
67
34
8
15
41
1.78
19888559--19888609
17
3.1
17
75
8
52
82
7
3
5
0.94
19888928--19888967
21
1.9
22
85
10
57
62
12
5
20
1.48
19895828--19895859
14
2.2
15
94
5
57
62
0
0
37
0.95
19902779--19902819
21
2.0
21
90
4
66
60
17
4
17
1.52
19905634--19905677
3
14.3
3
86
13
63
31
0
2
65
1.05
19905856--19905895
21
2.0
21
85
5
55
25
2
5
67
1.23
19905976--19906014
20
1.9
21
89
5
62
74
2
0
23
0.94
19906159--19906233
32
2.3
32
93
0
123
12
14
42
30
1.82
19906918--19906966
24
2.0
24
84
0
62
18
2
59
20
1.48
19907027--19907065
19
2.1
19
85
0
51
25
0
5
69
1.09
19907205--19907231
11
2.5
11
100
0
54
0
7
0
92
0.38
19907406--19907578
49
3.6
49
88
4
262
38
23
11
26
1.89
19908333--19908373
8
4.7
9
82
14
50
7
7
0
85
0.75
19908320--19908373
26
2.0
27
92
3
92
11
7
0
81
0.87
19908333--19908374
17
2.3
19
92
8
70
7
7
0
85
0.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19920098--19920327
57
4.0
57
89
4
347
35
11
7
45
1.69
19920098--19920327
113
2.0
117
88
5
353
35
11
7
45
1.69
19920345--19920495
18
8.6
18
72
10
80
74
5
2
17
1.13
19920335--19920412
26
2.9
26
80
12
79
79
1
3
15
0.94
19920330--19920428
26
4.0
26
69
24
70
76
1
5
17
1.01
19921294--19921338
17
2.7
16
76
10
54
71
0
11
17
1.14
19921420--19921470
17
3.2
15
78
13
57
76
3
1
17
1.03
19921448--19921547
4
23.8
4
72
20
71
71
2
1
26
1.04
19921448--19921578
7
18.4
7
68
18
67
69
2
0
27
1.06
19921446--19921579
19
6.9
19
68
24
75
70
2
0
26
1.04
19921447--19921510
25
2.5
25
80
9
76
71
1
0
26
0.94
19921443--19921542
25
4.1
25
73
17
75
73
2
0
25
0.94
19921448--19921587
23
5.8
24
66
23
64
69
2
0
27
1.07
19921592--19921626
18
2.0
17
94
5
61
85
0
14
0
0.59
19921592--19921626
9
3.9
9
88
11
54
85
0
14
0
0.59
19921795--19921864
1
70.0
1
79
0
77
0
0
10
90
0.47
19921795--19921864
7
10.4
7
90
6
94
0
0
10
90
0.47
19921795--19921864
27
2.7
26
91
8
108
0
0
10
90
0.47
19921871--19922043
42
4.1
42
94
0
294
35
24
16
24
1.95
19927274--19927502
116
2.0
118
87
5
340
34
9
7
48
1.65
19927512--19927593
6
13.7
6
75
18
73
80
2
2
14
0.92
19927519--19927653
11
11.8
11
73
16
57
75
4
2
17
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19927522--19927654
18
7.6
18
73
9
87
75
4
2
17
1.06
19927519--19927640
28
4.2
28
73
13
88
75
4
1
18
1.06
19928648--19928699
21
2.5
22
76
20
58
69
1
0
28
0.99
19928649--19928790
68
2.1
67
81
11
157
69
4
2
23
1.17
19929149--19929186
15
2.5
15
86
0
58
44
0
0
55
0.99
19931494--19931532
15
2.5
15
87
4
51
84
2
5
7
0.84
19932333--19932375
18
2.4
17
85
14
52
81
2
13
2
0.89
19932366--19932401
17
2.1
17
89
0
54
77
5
0
16
0.94
19932456--19932485
3
10.3
3
92
7
53
66
0
0
33
0.92
19932645--19933176
115
4.6
114
80
5
527
45
14
20
19
1.85
19932704--19933144
230
1.9
230
85
2
600
46
14
20
18
1.84
19943973--19944014
15
2.9
15
79
13
52
76
0
4
19
0.96
19943958--19944015
11
5.2
11
74
12
55
74
0
5
20
1.01
19943983--19944028
19
2.5
19
82
3
58
76
2
8
13
1.11
19944828--19944880
11
5.0
10
78
17
54
83
1
3
11
0.87
19946043--19946072
1
30.0
1
93
0
51
96
3
0
0
0.21
19947906--19947948
22
1.9
23
85
4
61
37
2
9
51
1.47
19948781--19948831
2
25.5
2
100
0
102
50
0
49
0
1.00
19948874--19948903
15
2.0
15
93
0
51
20
0
3
76
0.92
19948926--19948987
26
2.4
26
94
0
106
38
11
3
46
1.56
19953223--19953252
14
2.1
14
93
0
51
30
33
3
33
1.74
19953996--19954063
35
1.9
35
87
0
100
32
14
17
35
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19954749--19954787
16
2.4
16
86
4
51
41
0
7
51
1.31
19954664--19955179
60
8.7
58
83
8
601
35
12
6
45
1.70
19955196--19955276
5
15.8
5
73
19
60
76
2
6
14
1.08
19955206--19955276
21
3.3
20
74
14
56
76
2
7
14
1.11
19955196--19955276
17
4.5
17
72
18
58
76
2
6
14
1.08
19955196--19955276
11
6.8
11
72
18
56
76
2
6
14
1.08
19956204--19956247
18
2.4
18
92
3
70
70
6
9
13
1.33
19956222--19956330
21
4.9
23
72
11
77
70
2
4
22
1.18
19956240--19956330
44
2.1
41
88
9
130
71
2
3
23
1.12
19956240--19956315
22
3.5
22
81
10
95
71
2
3
22
1.16
19956233--19956462
4
57.0
4
68
13
84
65
3
3
27
1.23
19956263--19956383
25
5.0
25
71
16
76
67
2
2
27
1.16
19956316--19956447
22
5.8
22
67
20
60
62
3
3
31
1.25
19956336--19956462
15
8.4
14
70
23
64
62
3
3
29
1.28
19956478--19956519
7
5.9
7
81
15
50
76
0
0
23
0.79
19956483--19956522
11
3.5
12
83
10
57
77
0
0
22
0.77
19956476--19956522
22
2.1
22
92
7
78
78
0
0
21
0.75
19956487--19956520
17
2.1
15
89
10
50
76
0
0
23
0.79
19956698--19956856
42
3.8
42
80
7
162
33
21
18
25
1.96
19956765--19956865
40
2.5
40
85
8
141
35
18
17
27
1.94
19956839--19956890
25
2.1
25
100
0
104
34
17
21
26
1.95
19956808--19956931
66
1.9
66
98
0
239
34
17
20
27
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19957768--19957853
17
5.1
17
88
0
127
39
13
15
31
1.86
19964074--19964552
48
10.0
47
81
8
547
26
11
22
38
1.89
19964074--19964552
95
5.0
94
87
3
631
26
11
22
38
1.89
19964024--19964552
190
2.7
192
84
5
728
27
11
22
38
1.89
19965973--19966012
20
2.0
21
85
5
55
67
5
2
25
1.23
19977048--19977110
30
2.0
32
82
11
78
47
3
1
47
1.27
19979524--19979725
72
2.8
72
88
1
287
43
5
4
46
1.48
19980846--19980900
9
5.8
9
83
12
74
58
9
0
32
1.30
19980845--19980939
10
9.7
10
75
8
72
56
8
0
34
1.29
19980837--19980898
11
6.1
11
81
11
62
61
8
0
30
1.25

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129