Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167838.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_11, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23775123

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   

This is table  84  of  129  ( 15449 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15096513--15096580
14
4.6
14
72
17
57
55
0
2
41
1.15
15096521--15096585
22
2.9
23
73
13
64
55
0
3
41
1.15
15097201--15097266
27
2.5
27
83
9
75
54
0
1
43
1.09
15097246--15097288
20
2.2
20
83
8
52
51
0
2
46
1.13
15097558--15097603
19
2.4
19
86
13
67
50
0
0
50
1.00
15097524--15097595
36
1.9
39
83
8
96
51
1
1
45
1.18
15097563--15097621
32
1.9
29
83
10
73
50
1
0
47
1.11
15097558--15097613
19
2.9
19
80
12
62
50
1
0
48
1.11
15097727--15097753
8
3.4
8
100
0
54
37
0
0
62
0.95
15098704--15098735
17
1.9
16
93
6
55
40
0
3
56
1.15
15099232--15099288
21
2.7
20
82
17
62
54
1
0
43
1.10
15099422--15099456
15
2.3
15
90
0
52
51
5
5
37
1.50
15099680--15099719
16
2.5
15
80
11
53
37
2
0
60
1.11
15099720--15099766
4
11.2
4
78
17
51
48
0
2
48
1.13
15099718--15099803
22
3.8
21
76
18
68
47
1
3
47
1.26
15099664--15099766
38
2.7
37
76
18
97
44
0
0
53
1.13
15099851--15100114
17
15.7
17
64
22
71
49
1
3
45
1.28
15099865--15099907
20
2.4
17
80
11
50
48
0
2
48
1.14
15099897--15099938
18
2.3
19
80
19
54
47
2
0
50
1.14
15100078--15100111
15
2.3
15
89
0
50
47
0
0
52
1.00
15100084--15100112
15
1.9
15
100
0
58
41
0
0
58
0.98
15100665--15100703
19
2.1
18
95
4
69
53
0
0
46
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15100865--15100904
18
2.4
16
87
8
53
50
2
5
42
1.37
15102341--15102380
21
1.9
21
85
10
55
55
2
2
40
1.27
15102632--15102692
27
2.3
26
83
11
70
52
0
1
45
1.10
15103588--15103628
14
3.1
14
75
10
50
56
0
0
43
0.99
15103588--15103688
26
3.7
27
70
19
75
51
0
0
46
1.14
15103622--15103670
17
2.9
17
75
19
50
53
0
2
44
1.12
15103800--15103837
16
2.4
16
86
4
51
47
2
2
47
1.30
15103948--15104004
25
2.3
24
79
8
62
49
3
1
45
1.29
15104009--15104049
21
2.0
21
85
9
57
51
0
2
46
1.14
15104032--15104066
13
2.9
12
91
8
54
45
0
0
54
0.99
15104237--15104302
30
2.1
33
83
13
86
50
1
1
46
1.20
15108227--15108257
15
2.1
15
93
0
53
32
22
25
19
1.97
15108274--15108340
14
4.7
15
82
12
52
17
0
4
77
0.93
15108287--15108339
7
7.6
7
87
8
72
22
0
1
75
0.90
15108355--15108513
7
22.1
7
66
24
57
31
2
2
63
1.21
15108362--15108513
4
38.0
4
68
22
54
31
2
1
63
1.19
15108303--15108504
8
22.2
9
67
23
56
29
3
1
64
1.21
15108371--15108439
27
2.6
27
80
19
90
31
2
1
63
1.18
15108453--15108541
41
2.1
41
81
6
99
30
3
4
61
1.32
15108453--15108573
20
5.9
21
75
9
115
28
4
3
63
1.29
15108466--15108573
21
5.2
20
76
6
101
27
4
2
64
1.27
15108469--15108590
42
3.0
41
82
9
133
25
4
3
66
1.27
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15109353--15109421
7
9.1
7
76
16
50
21
1
0
76
0.86
15109367--15109414
13
3.8
13
76
23
57
25
0
0
75
0.81
15109485--15109695
58
3.5
58
74
14
160
45
5
14
35
1.68
15110445--15110495
25
2.0
25
100
0
102
27
7
37
27
1.84
15113633--15113691
31
1.9
30
82
3
73
69
0
22
8
1.15
15115428--15116101
41
16.1
40
78
11
389
26
15
19
38
1.92
15115428--15116045
82
7.4
81
80
9
498
26
16
18
38
1.92
15115456--15116088
123
5.0
123
81
7
654
26
16
19
38
1.92
15115805--15116101
83
3.5
83
81
7
325
26
15
19
39
1.91
15116291--15116419
7
17.1
7
70
17
55
20
3
3
72
1.12
15116284--15116419
8
15.9
8
67
18
53
19
2
3
73
1.11
15116301--15116341
20
2.2
19
91
8
66
26
0
0
73
0.84
15116365--15116522
4
40.5
4
68
19
59
29
2
3
65
1.21
15116431--15116521
10
8.8
10
75
11
76
31
3
2
62
1.23
15116292--15116522
14
15.9
14
67
18
66
26
3
3
67
1.20
15116476--15116580
42
2.5
40
80
10
113
28
3
1
65
1.20
15117357--15117429
3
23.7
3
89
8
51
21
0
6
71
1.09
15117459--15117522
5
12.8
5
82
15
71
17
1
0
81
0.77
15117458--15117517
11
5.3
11
81
15
77
16
1
0
81
0.77
15117459--15117522
29
2.3
27
92
7
103
17
1
0
81
0.77
15117458--15117527
24
3.0
23
86
14
99
17
2
0
80
0.84
15117536--15117654
57
2.1
57
90
0
184
43
7
12
36
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15117626--15117681
27
2.1
27
96
0
103
39
12
7
41
1.70
15117569--15117725
86
1.8
84
91
5
262
38
10
12
38
1.76
15117653--15117774
57
2.1
59
90
3
194
42
6
12
38
1.68
15122150--15122407
118
2.2
119
93
4
443
42
3
5
48
1.43
15122486--15122566
22
3.7
21
75
21
78
45
2
0
51
1.14
15122495--15122547
24
2.2
24
84
15
67
47
1
0
50
1.12
15122481--15122573
7
12.7
7
70
16
64
46
2
0
51
1.13
15122800--15122834
17
2.2
17
90
10
56
45
0
2
51
1.16
15122779--15122843
23
2.8
22
73
17
60
47
1
1
49
1.20
15122882--15122945
34
2.0
34
82
14
82
46
1
4
46
1.33
15122979--15123008
8
3.6
8
91
8
51
50
0
0
50
1.00
15123061--15123113
21
2.5
21
77
17
56
43
0
0
56
0.99
15123319--15123382
20
3.3
19
76
20
60
50
4
1
43
1.32
15123475--15123523
20
2.5
20
86
0
62
44
2
0
53
1.12
15124071--15124784
176
4.0
177
80
6
721
42
10
7
39
1.68
15125115--15125157
21
2.0
21
81
0
50
51
6
4
37
1.50
15125739--15125776
17
2.2
17
86
9
51
42
0
2
55
1.14
15126275--15126333
29
2.1
28
81
9
66
54
0
3
42
1.17
15126326--15126379
28
1.9
28
85
7
74
53
1
0
44
1.11
15126326--15126438
21
5.6
22
70
19
61
47
1
0
49
1.17
15126547--15126625
27
2.9
28
75
16
76
46
0
3
49
1.19
15127185--15127214
15
2.0
15
100
0
60
46
0
0
53
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15127526--15127565
19
2.1
19
86
9
55
52
0
0
47
1.00
15127547--15127691
28
5.1
29
72
20
85
47
1
1
49
1.18
15127614--15127691
31
2.5
31
80
13
90
51
1
0
47
1.09
15128293--15128345
27
1.9
27
81
11
63
37
1
5
54
1.35
15129334--15129378
13
3.5
13
84
3
56
53
0
0
46
1.00
15129522--15129605
9
10.0
8
68
26
50
54
2
3
39
1.31
15129543--15129604
31
2.0
31
81
12
74
58
3
4
33
1.36
15129585--15129652
34
2.0
35
82
8
86
47
4
1
47
1.31
15129761--15129803
14
3.1
14
80
12
52
51
0
2
46
1.13
15129758--15129811
22
2.5
22
80
11
60
51
1
1
44
1.22
15130568--15130660
42
2.3
39
76
12
91
44
2
5
48
1.37
15130564--15130716
19
8.5
19
68
23
66
47
1
3
47
1.29
15130642--15130708
25
2.9
23
73
6
64
52
0
1
46
1.09
15130690--15130726
17
2.2
17
90
9
58
48
2
0
48
1.15
15130690--15130762
17
4.6
16
78
8
51
45
1
0
53
1.09
15130743--15130780
18
2.1
18
90
9
60
44
0
0
55
0.99
15131484--15131540
29
2.0
27
83
6
69
56
3
0
40
1.17
15132168--15132249
33
2.5
34
84
4
105
53
2
3
40
1.32
15132370--15132426
23
2.4
25
80
14
66
43
1
3
50
1.29
15132479--15132505
3
9.0
3
100
0
54
33
0
0
66
0.92
15132741--15132781
14
2.7
15
85
7
57
43
2
0
53
1.13
15132740--15132782
23
1.9
23
85
4
61
46
2
0
51
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15132995--15133031
19
1.9
19
94
0
65
56
0
2
40
1.13
15133247--15133314
20
3.6
18
71
26
59
45
4
2
47
1.38
15133410--15133457
19
2.3
22
86
10
66
43
2
2
52
1.24
15133620--15133660
20
2.0
20
95
0
73
46
12
9
31
1.74
15133832--15133870
19
2.2
18
86
13
55
46
0
0
53
1.00
15134112--15134150
20
2.0
20
90
10
62
51
2
0
46
1.14
15134170--15134234
9
7.0
9
74
19
53
53
1
1
43
1.19
15134476--15134521
12
3.9
11
81
13
56
45
0
2
52
1.13
15134481--15134534
21
2.6
20
76
5
54
48
0
1
50
1.11
15134637--15134678
15
2.9
14
86
13
50
50
2
2
45
1.27

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129