Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168481.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_8, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25818110

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   

This is table  93  of  127  ( 15156 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17492512--17492586
39
1.9
38
82
12
91
22
1
2
73
1.04
17496051--17496077
14
1.9
14
100
0
54
55
0
0
44
0.99
17506891--17506932
10
4.2
10
90
0
57
57
0
0
42
0.99
17506891--17506932
4
10.5
4
89
0
57
57
0
0
42
0.99
17506891--17506932
6
7.0
6
91
0
57
57
0
0
42
0.99
17510482--17510530
23
2.1
23
85
7
64
40
4
12
42
1.61
17510505--17510779
58
4.8
57
84
8
296
37
8
3
50
1.49
17510505--17510782
111
2.4
114
84
8
336
38
8
3
50
1.49
17519790--17519840
4
13.0
4
76
12
52
21
1
5
70
1.18
17520137--17520180
20
2.1
21
84
12
56
79
4
0
15
0.89
17520795--17520842
23
2.3
22
80
16
57
60
2
4
33
1.27
17521732--17521831
31
3.3
30
90
5
148
37
6
3
54
1.41
17521827--17521860
16
2.1
16
89
10
52
70
0
0
29
0.87
17521827--17521861
17
2.1
16
89
5
52
71
0
0
28
0.86
17522024--17522084
31
2.0
31
86
0
86
22
13
13
50
1.75
17531329--17531574
58
4.2
58
84
2
307
33
13
5
47
1.65
17531334--17531562
116
2.0
116
87
5
338
33
13
6
46
1.68
17532620--17532845
85
2.6
85
86
3
285
40
16
22
20
1.91
17532808--17532882
31
2.4
31
95
0
132
36
16
21
26
1.94
17532844--17533000
85
1.9
84
87
1
233
43
14
21
21
1.87
17533226--17533274
17
2.9
17
82
14
66
40
6
24
28
1.79
17533226--17533274
16
2.9
18
85
14
70
40
6
24
28
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17533189--17533348
17
9.6
17
69
4
65
41
12
18
26
1.86
17533270--17533358
17
5.3
17
69
2
63
37
14
19
29
1.91
17534702--17534762
23
2.5
24
81
7
70
13
9
1
75
1.12
17534723--17534760
16
2.4
16
86
8
51
10
7
2
78
1.04
17538701--17539053
58
6.0
58
82
6
374
33
13
5
46
1.68
17539031--17539080
26
2.0
26
84
4
66
22
4
4
70
1.21
17540479--17540511
10
3.5
10
84
16
52
45
0
0
54
0.99
17540978--17541006
8
3.8
8
95
4
51
93
6
0
0
0.36
17541950--17541995
19
2.5
18
80
13
58
73
4
4
17
1.15
17542379--17542425
22
2.1
22
92
0
76
55
25
0
19
1.43
17542451--17542497
17
2.8
17
87
3
69
40
38
0
21
1.53
17542417--17542503
42
2.0
43
84
2
113
42
34
0
22
1.54
17542577--17542648
30
2.4
29
77
6
81
52
20
0
26
1.47
17542593--17542702
53
2.1
53
92
0
184
47
25
0
26
1.58
17542713--17542940
15
15.3
15
67
23
92
46
30
2
20
1.62
17542578--17542940
8
47.5
8
66
16
87
47
28
1
22
1.61
17542713--17542796
34
2.6
31
87
12
125
47
33
0
19
1.49
17542721--17542848
17
8.2
16
78
12
92
46
33
0
20
1.51
17542833--17542924
32
3.0
31
81
7
98
47
29
4
18
1.67
17548822--17548871
17
3.1
17
81
13
52
74
0
18
8
1.06
17548837--17548871
17
2.1
17
89
5
54
68
0
20
11
1.20
17550255--17550329
28
2.7
28
91
0
114
29
26
21
22
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17550766--17551030
33
8.0
33
65
15
102
35
21
14
28
1.93
17550751--17551025
66
4.1
65
72
11
202
36
21
13
29
1.92
17551130--17551393
36
7.4
37
77
10
192
16
17
13
52
1.75
17551115--17551386
107
2.6
105
80
6
280
16
17
13
52
1.74
17551231--17551997
36
21.4
36
71
7
240
16
16
13
52
1.74
17551379--17551573
108
1.8
108
85
0
273
17
13
14
54
1.70
17551093--17551968
393
2.2
393
78
5
853
17
16
13
52
1.75
17551631--17551923
107
2.8
105
75
6
268
16
17
13
52
1.75
17552960--17552986
13
2.1
13
100
0
54
51
25
14
7
1.68
17554082--17554129
20
2.4
20
75
0
51
29
16
16
37
1.91
17554163--17554215
4
13.0
4
81
18
65
22
1
1
73
1.03
17554647--17554730
3
27.7
3
92
2
132
65
1
2
30
1.13
17554925--17554984
9
6.9
9
78
14
54
40
40
1
18
1.60
17554953--17555001
17
3.1
17
80
8
59
44
36
4
14
1.64
17555103--17555447
8
45.2
8
68
16
65
48
29
1
20
1.59
17555167--17555234
9
8.3
9
69
19
51
48
32
0
19
1.49
17555168--17555234
24
2.8
24
95
0
116
47
32
0
19
1.50
17555192--17555274
31
2.6
31
79
5
78
48
26
1
24
1.59
17555303--17555336
17
2.1
16
88
5
50
38
44
0
17
1.49
17555103--17555405
15
20.3
15
68
16
89
48
30
1
19
1.59
17555438--17555478
18
2.3
18
87
8
57
53
31
0
14
1.41
17556223--17556270
24
2.0
24
95
0
87
39
16
2
41
1.60
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17563865--17563917
21
2.4
21
84
6
61
41
0
9
49
1.35
17563882--17563924
19
2.2
19
87
8
59
46
0
9
44
1.35
17564168--17564192
13
1.9
13
100
0
50
32
4
8
56
1.47
17564735--17564771
8
4.6
8
86
0
56
43
0
0
56
0.99
17564735--17564789
16
3.6
16
80
11
62
47
0
0
52
1.00
17564765--17564816
21
2.4
22
90
9
81
48
0
0
51
1.00
17565416--17565457
22
1.9
22
85
9
59
33
9
0
57
1.31
17565855--17565891
3
12.3
3
100
0
74
67
0
0
32
0.91
17566612--17566636
3
8.3
3
100
0
50
32
0
0
68
0.90
17566661--17566725
21
3.5
20
72
27
54
64
3
0
32
1.09
17566661--17566775
37
3.1
36
81
5
131
60
3
1
34
1.24
17566664--17566763
18
5.4
18
68
18
62
60
3
2
35
1.24
17569227--17569288
16
3.9
15
78
14
54
46
0
0
53
1.00
17571576--17571641
33
2.0
33
82
5
80
65
3
9
22
1.36
17573309--17573447
61
2.3
61
80
10
158
35
1
18
44
1.59
17583397--17583429
16
2.1
16
94
0
57
54
6
15
24
1.63
17587057--17587113
8
7.4
8
74
7
55
57
1
0
40
1.09
17587036--17587120
38
2.2
38
93
0
143
60
1
0
38
1.05
17587141--17587184
22
2.0
21
86
4
61
50
0
0
50
1.00
17587123--17587183
31
2.0
29
81
12
70
50
0
1
47
1.10
17590456--17590509
16
3.2
16
90
10
90
22
24
11
42
1.85
17603401--17603434
15
2.3
15
89
0
50
17
20
5
55
1.62
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17608342--17608391
14
3.6
14
81
8
57
28
0
8
64
1.22
17609017--17609079
21
3.0
21
88
0
90
20
7
34
36
1.82
17611323--17611362
20
2.0
21
85
5
55
70
12
12
5
1.33
17616136--17616206
32
2.3
32
85
4
92
29
15
11
43
1.81
17616423--17616455
16
2.0
17
94
5
59
0
0
21
78
0.75
17616418--17616464
17
2.7
17
83
12
60
0
2
21
76
0.89
17622011--17622056
3
15.0
3
86
8
58
34
0
0
65
0.93
17622819--17622865
24
2.0
24
95
0
85
25
31
21
21
1.98
17628447--17628561
57
2.0
57
93
0
194
27
29
9
33
1.89
17639502--17639527
3
8.7
3
100
0
52
30
0
0
69
0.89
17643356--17643404
22
2.2
21
85
10
62
6
26
4
63
1.36
17643591--17643623
6
5.7
6
85
7
50
84
0
15
0
0.61
17643791--17643964
46
3.8
46
75
6
163
47
15
8
28
1.75
17643827--17643964
46
3.0
47
78
7
165
47
13
7
30
1.72
17644006--17644235
104
2.2
104
80
8
269
42
20
10
26
1.84
17643982--17644270
154
1.9
152
84
2
391
41
19
10
28
1.84
17643923--17644263
50
6.8
50
77
6
314
43
19
9
26
1.83
17655901--17655929
6
4.8
6
100
0
58
68
13
0
17
1.20
17655964--17656168
60
3.4
58
86
6
270
35
13
5
45
1.67
17655964--17656194
60
3.9
59
84
6
263
35
12
5
45
1.66
17656212--17656268
30
1.9
29
82
10
71
77
1
7
14
1.06
17656289--17656326
4
9.5
4
88
0
58
76
0
2
21
0.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17657333--17657463
15
8.6
14
66
19
59
67
3
2
27
1.18
17657327--17657473
16
8.4
18
66
25
59
68
3
2
26
1.17
17657415--17657476
27
2.2
27
80
11
72
69
3
1
25
1.13
17657381--17657474
39
2.4
39
73
19
88
70
4
2
23
1.16
17658733--17658775
23
1.9
22
85
4
59
81
0
11
6
0.87
17662935--17662989
25
2.2
26
83
6
69
67
1
3
27
1.17
17663757--17663786
10
3.0
10
95
0
51
56
0
0
43
0.99
17667071--17667236
64
2.7
61
86
9
221
32
13
8
45
1.74
17667273--17667394
18
7.2
17
71
12
65
76
4
4
15
1.09
17667252--17667352
22
4.6
21
71
14
60
74
1
7
15
1.14

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127