Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168492.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_9, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25814696

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   

This is table  120  of  126  ( 15044 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23709313--23709354
19
2.2
19
86
0
57
42
9
2
45
1.49
23720630--23720678
23
2.1
23
84
3
62
51
12
6
30
1.64
23721858--23721891
16
2.1
16
100
0
68
23
32
5
38
1.79
23727477--23727517
14
2.8
15
85
7
57
56
2
0
41
1.13
23727832--23727865
17
2.0
17
88
0
50
58
0
0
41
0.98
23734046--23734093
21
2.3
22
89
7
73
68
0
0
31
0.90
23734041--23734089
21
2.5
19
78
18
55
65
0
0
34
0.93
23734133--23734187
20
2.8
19
76
10
58
52
0
0
47
1.00
23734719--23734743
13
1.9
13
100
0
50
28
0
0
72
0.86
23734768--23734816
17
2.9
17
80
17
57
59
0
0
40
0.98
23735394--23735443
22
2.2
23
86
10
68
64
2
0
34
1.05
23735389--23735444
22
2.6
22
75
10
62
64
1
0
33
1.04
23736161--23736234
30
2.4
30
86
4
94
56
0
4
39
1.18
23736183--23736236
23
2.4
22
84
9
65
61
0
1
37
1.07
23736183--23736236
22
2.4
24
84
9
69
61
0
1
37
1.07
23740432--23740592
80
2.0
80
95
0
286
28
22
26
21
1.99
23742375--23742480
18
6.1
18
75
14
80
53
3
0
42
1.18
23742397--23742572
31
5.4
31
70
18
117
53
3
0
42
1.24
23742454--23742524
25
3.0
24
76
14
58
50
4
1
43
1.30
23742501--23742578
8
10.1
8
71
20
60
52
3
1
42
1.27
23748565--23748602
15
2.5
15
87
8
51
31
0
0
68
0.90
23748770--23748795
4
6.5
4
100
0
52
26
0
0
73
0.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23748962--23749030
25
2.5
28
77
15
74
59
0
0
40
0.97
23749583--23749705
62
2.0
62
95
0
219
37
7
13
41
1.73
23750055--23750139
29
2.9
29
81
10
91
52
2
2
42
1.27
23751750--23751774
12
2.1
12
100
0
50
52
0
0
48
1.00
23754061--23754088
2
14.0
2
100
0
56
50
0
0
50
1.00
23755255--23755302
22
2.3
20
78
7
51
62
0
6
31
1.20
23764433--23764478
23
2.0
24
86
4
67
47
4
2
45
1.34
23767406--23767451
14
3.4
13
82
8
56
52
0
2
45
1.13
23767406--23767454
13
3.6
14
83
5
57
53
0
2
44
1.12
23768136--23768176
5
7.8
5
84
10
55
73
0
0
26
0.84
23768130--23768166
17
2.1
17
90
5
56
67
0
2
29
1.04
23769206--23769260
25
2.2
24
81
12
67
72
1
20
5
1.13
23769642--23769669
2
14.0
2
100
0
56
0
50
0
50
1.00
23775622--23775663
22
2.0
21
85
4
57
7
30
4
57
1.47
23783572--23783631
27
2.3
26
88
5
93
63
1
3
31
1.20
23783571--23783639
24
2.7
25
82
8
77
62
1
2
33
1.19
23785827--23785886
31
1.9
31
89
0
93
43
8
3
45
1.50
23789475--23789521
24
2.0
24
83
8
60
53
0
0
46
1.00
23789495--23789529
18
1.9
18
88
0
52
62
0
0
37
0.95
23789944--23789998
20
2.8
20
73
13
60
61
0
1
36
1.06
23813826--23813875
13
4.1
12
80
12
57
36
2
0
62
1.07
23818961--23819028
34
2.0
34
85
0
91
30
17
22
29
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23821014--23821124
37
3.0
38
65
7
102
15
18
13
52
1.75
23820978--23821124
73
2.0
74
90
1
233
16
17
12
54
1.71
23821908--23821946
18
2.2
17
90
4
60
58
0
2
38
1.12
23822220--23822286
18
3.7
18
67
9
55
41
5
2
49
1.42
23822313--23822361
24
2.0
26
88
8
75
46
4
0
48
1.20
23822646--23822808
73
2.2
75
78
7
172
37
11
3
48
1.54
23823078--23823107
15
2.0
15
93
0
51
70
3
0
26
1.03
23823890--23823951
3
20.7
3
80
6
54
24
38
3
33
1.71
23826578--23826627
21
2.4
21
86
0
64
44
4
0
52
1.20
23827308--23827354
15
3.3
15
77
20
55
55
0
0
44
0.99
23827308--23827383
27
2.9
26
80
9
75
51
0
1
47
1.09
23827467--23827492
3
8.7
3
100
0
52
69
0
0
30
0.89
23833945--23833987
21
2.1
22
87
12
65
67
0
4
27
1.10
23835998--23836055
24
2.5
24
82
17
70
44
1
1
51
1.21
23836975--23837012
19
2.0
19
89
0
58
26
2
0
71
1.00
23836975--23837009
13
2.8
13
91
4
54
28
2
0
68
1.04
23845539--23845571
11
3.1
11
86
4
50
57
12
9
21
1.62
23846464--23846609
66
2.2
66
77
2
159
10
26
19
43
1.84
23846644--23846837
99
2.0
98
83
4
246
10
27
21
39
1.87
23846958--23847003
21
2.2
21
92
0
74
4
43
15
36
1.66
23867260--23867290
2
15.5
2
100
0
62
48
0
51
0
1.00
23868389--23868463
39
1.9
39
94
0
132
48
16
8
28
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23876491--23876525
15
2.3
15
90
9
54
51
5
5
37
1.50
23877941--23877969
2
14.5
2
100
0
58
51
0
0
48
1.00
23878784--23878825
22
1.9
22
85
9
59
57
0
2
40
1.12
23892602--23892762
73
2.2
72
84
6
209
47
22
13
17
1.82
23892987--23893026
21
1.9
21
84
0
53
47
0
0
52
1.00
23893122--23893160
20
2.0
20
89
0
60
20
0
7
71
1.10
23893468--23893516
25
2.0
25
88
8
73
38
2
10
48
1.48
23893629--23893673
23
2.0
23
86
4
65
44
2
11
42
1.52
23897549--23897721
87
2.0
87
93
0
292
47
13
16
21
1.81
23902849--23902892
11
3.9
11
79
5
52
45
0
0
54
0.99
23902849--23902904
6
10.2
6
75
14
50
48
0
0
51
1.00
23903005--23903043
19
2.1
19
90
0
60
61
0
0
38
0.96
23907197--23907229
16
2.1
16
100
0
66
18
12
12
57
1.64
23908870--23908917
22
2.4
21
80
13
57
35
4
2
58
1.29
23908937--23909021
30
2.9
28
77
16
84
42
0
16
41
1.48
23910439--23910482
13
3.3
13
84
9
54
65
0
4
29
1.12
23915698--23915723
13
2.0
13
100
0
52
61
7
0
30
1.24
23916226--23916286
32
1.9
32
93
0
104
47
3
4
44
1.41
23917099--23917144
23
2.0
22
84
16
58
36
0
2
60
1.09
23919431--23919460
12
2.4
13
94
5
53
6
16
13
63
1.50
23920128--23920157
2
15.0
2
100
0
60
50
0
0
50
1.00
23921390--23921449
30
2.0
30
86
0
84
31
15
8
45
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23928293--23928321
2
15.0
2
92
7
51
51
0
0
48
1.00
23928296--23928328
13
2.6
13
95
4
59
51
0
0
48
1.00
23928364--23928396
10
3.2
10
95
4
57
72
0
0
27
0.85
23928354--23928401
23
2.0
24
84
11
64
68
2
2
27
1.11
23936737--23936776
2
20.0
2
89
0
62
47
2
2
47
1.29
23940562--23940596
2
18.0
2
94
5
63
48
0
0
51
1.00
23950444--23950485
20
2.1
20
100
0
84
33
14
11
40
1.82
23951493--23951541
24
2.0
24
96
0
89
28
14
24
32
1.94
23953410--23953467
3
19.3
3
96
0
107
65
0
1
32
1.03
23954237--23954535
149
2.0
150
88
3
442
41
16
12
29
1.85
23955250--23956288
519
2.0
520
95
0
1864
34
15
18
31
1.92
23961008--23961032
12
2.1
12
100
0
50
32
8
0
60
1.26
23961295--23961337
5
8.2
5
85
10
59
72
0
0
27
0.85
23961445--23961478
14
2.4
14
90
0
50
32
0
0
67
0.91
23966705--23966740
13
2.7
13
86
4
54
0
22
0
77
0.76
23968660--23968702
16
2.9
15
86
6
52
58
0
0
41
0.98
23975577--23975610
17
2.0
17
88
0
50
8
23
5
61
1.47
23976229--23976264
16
2.2
16
95
0
63
38
19
19
22
1.93
23976771--23976818
25
1.9
25
87
8
71
54
8
16
20
1.68
23976939--23976982
22
2.0
22
91
8
72
43
13
9
34
1.76
23980807--23980850
22
2.0
22
91
8
72
45
13
9
31
1.75
23983943--23983986
22
2.0
22
95
0
79
31
11
13
43
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23984366--23984400
18
1.9
18
88
0
52
22
14
25
37
1.92
23987834--23987877
22
2.0
22
95
0
79
31
11
13
43
1.80
23992667--23992707
2
20.5
2
84
0
55
41
0
2
56
1.13
23994424--23994502
39
2.0
39
85
4
106
24
6
27
41
1.79
23996839--23996863
6
4.2
6
100
0
50
0
16
0
84
0.63
24002474--24002518
23
2.0
22
82
4
54
51
2
0
46
1.13
24003350--24003414
26
2.6
25
79
13
62
33
7
3
55
1.44
24004481--24004540
25
2.5
24
82
12
72
35
3
0
61
1.12
24005259--24005331
32
2.3
32
83
6
87
52
1
0
46
1.09
24013553--24013584
16
2.0
16
100
0
64
62
25
0
12
1.30

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126