Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167827.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_10, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24162007

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   

This is table  10  of  131  ( 15626 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2485053--2485112
23
2.5
23
78
5
66
36
1
0
61
1.06
2490489--2490539
21
2.5
21
96
3
95
49
0
0
50
1.00
2490512--2490572
30
2.0
30
87
0
86
54
0
0
45
1.00
2491214--2491317
42
2.5
42
93
4
178
54
0
0
45
0.99
2493480--2493513
15
2.3
15
89
0
50
55
0
0
44
0.99
2497364--2497390
13
2.1
13
100
0
54
29
25
22
22
1.99
2501809--2501833
2
12.5
2
100
0
50
52
0
0
48
1.00
2502775--2502818
20
2.2
20
83
4
52
22
29
6
40
1.80
2508784--2508813
9
3.2
9
95
4
51
56
0
43
0
0.99
2522781--2522826
18
2.6
18
90
10
69
30
2
4
63
1.26
2523450--2523482
17
2.0
17
88
5
50
27
0
0
72
0.85
2530522--2530546
2
12.5
2
100
0
50
48
0
0
52
1.00
2532771--2532795
12
2.1
12
100
0
50
36
0
0
64
0.94
2533325--2533358
17
1.9
18
94
5
61
58
0
0
41
0.98
2551355--2551425
32
2.2
32
97
0
133
33
18
9
38
1.84
2565246--2565282
15
2.5
15
86
0
56
27
2
21
48
1.63
2571126--2571155
16
1.9
16
93
6
53
13
36
3
46
1.60
2576712--2576742
2
15.5
2
100
0
62
0
48
0
51
1.00
2586517--2586555
11
3.4
11
80
13
51
71
0
0
28
0.86
2586566--2586611
21
2.1
22
84
4
58
60
2
0
36
1.09
2586563--2586613
22
2.3
22
80
6
59
60
1
0
37
1.08
2588659--2588693
17
2.1
17
88
0
52
45
2
8
42
1.49
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2589192--2589221
15
2.0
15
93
0
51
36
13
6
43
1.70
2589523--2589562
7
5.7
7
96
0
71
60
0
25
15
1.35
2592436--2592461
13
2.0
13
100
0
52
0
7
0
92
0.39
2592437--2592464
14
2.0
14
100
0
56
0
7
0
92
0.37
2595268--2595305
2
19.0
2
100
0
76
50
0
50
0
1.00
2598038--2598097
4
15.2
4
82
3
77
51
21
1
25
1.57
2605348--2605377
15
2.0
15
93
0
51
50
0
0
50
1.00
2605357--2605434
24
3.5
22
75
13
63
55
0
2
42
1.13
2605366--2605466
41
2.4
42
82
14
129
56
0
1
40
1.17
2605418--2605471
18
3.1
18
70
17
51
57
3
0
38
1.17
2607368--2607417
17
3.0
16
82
8
55
60
0
0
40
0.97
2607360--2607474
39
3.0
37
72
16
101
54
0
0
43
1.12
2607381--2607458
40
2.0
40
82
5
95
57
0
0
42
0.98
2607596--2607646
24
2.1
24
88
0
75
56
1
3
37
1.29
2607596--2607662
24
2.9
23
70
12
57
52
1
2
43
1.25
2608841--2608919
29
2.7
29
84
2
86
34
5
2
58
1.34
2609034--2609077
23
1.9
23
86
9
63
63
2
2
31
1.19
2614705--2615051
180
1.9
181
93
1
599
40
22
12
23
1.89
2615505--2615598
41
2.4
39
75
18
95
47
1
0
51
1.07
2622756--2622791
6
6.0
6
86
0
54
61
0
5
33
1.19
2623068--2623116
25
2.0
25
88
4
73
61
4
2
32
1.26
2624104--2624280
93
1.9
93
97
0
336
31
12
19
36
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2629814--2629861
24
2.0
24
87
0
69
43
14
8
33
1.75
2636295--2636320
1
26.0
1
100
0
52
100
0
0
0
0.00
2638354--2638398
23
2.0
23
90
0
72
62
2
2
33
1.20
2645676--2645707
14
2.3
14
100
0
64
53
0
6
40
1.26
2645701--2645749
26
2.0
25
84
8
64
40
0
6
53
1.26
2645806--2645878
25
2.9
24
82
11
92
47
0
1
50
1.09
2645772--2645873
47
2.0
51
80
14
115
47
0
0
50
1.14
2645805--2645878
9
8.6
9
72
19
59
48
0
1
50
1.09
2645842--2645937
16
5.6
16
71
19
68
50
1
2
46
1.20
2645848--2645939
19
5.2
17
78
12
80
51
1
1
46
1.15
2645995--2646054
18
3.4
17
84
9
75
40
0
1
58
1.08
2645967--2646018
23
2.3
23
83
6
70
36
0
1
61
1.07
2645968--2646054
36
2.2
41
86
9
121
40
0
1
58
1.05
2646516--2646726
57
3.7
57
86
4
293
36
10
7
45
1.67
2646516--2646727
115
1.9
112
88
5
309
36
10
7
45
1.66
2646744--2646836
5
17.6
5
78
18
84
77
0
5
17
0.95
2646740--2646836
17
6.1
16
77
22
75
77
0
6
16
0.96
2646744--2646841
6
16.0
6
74
17
78
76
0
5
18
0.96
2647198--2647317
4
30.2
4
67
15
54
70
1
5
22
1.18
2647244--2647294
17
2.9
17
91
8
77
70
0
9
19
1.14
2647536--2647567
16
2.0
16
100
0
64
0
0
12
87
0.54
2647652--2647800
41
3.6
42
87
2
221
36
20
14
28
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2649656--2649700
18
2.5
18
85
7
56
4
15
0
80
0.87
2649666--2649745
35
2.4
35
78
17
89
7
16
0
76
1.00
2649691--2649736
21
2.2
20
85
11
58
8
13
0
78
0.97
2649712--2649745
16
2.3
15
90
10
52
8
14
0
76
1.01
2653639--2653852
57
3.7
58
81
7
265
37
11
7
43
1.69
2653639--2653852
117
1.8
115
90
5
340
37
11
7
43
1.69
2653871--2653951
5
16.6
5
74
21
66
76
1
3
18
1.00
2653871--2653951
13
6.6
13
73
20
68
76
1
3
18
1.00
2653867--2653950
22
3.7
23
71
22
70
76
1
4
17
1.03
2653871--2653951
8
8.3
10
72
24
66
76
1
3
18
1.00
2653866--2653941
17
4.4
17
77
9
66
76
0
5
18
0.97
2654351--2654406
24
2.3
25
82
11
64
67
3
7
21
1.30
2654378--2654435
17
3.7
15
80
11
64
74
0
5
20
1.01
2654395--2654462
28
2.4
28
87
4
93
70
0
1
27
0.96
2654587--2654635
15
3.3
15
77
8
55
40
0
4
55
1.19
2654752--2654797
22
2.1
22
83
0
56
34
10
2
52
1.49
2655224--2655282
25
2.4
23
78
13
64
38
11
15
33
1.84
2657058--2657308
14
17.8
14
73
13
142
19
1
31
47
1.57
2657158--2657208
15
3.4
16
76
13
54
19
0
31
49
1.49
2657205--2657340
15
9.3
15
80
10
113
20
1
29
48
1.58
2657202--2657308
29
3.7
29
82
7
137
16
0
34
47
1.53
2657205--2657308
44
2.4
44
85
1
147
17
0
32
49
1.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2658788--2658941
78
2.0
78
98
0
299
15
11
48
24
1.78
2659150--2659320
90
1.9
91
95
2
308
40
2
4
52
1.35
2659150--2659329
92
2.0
90
92
2
279
41
2
5
51
1.38
2659181--2659370
92
2.1
90
80
8
208
42
2
3
52
1.31
2659977--2660016
17
2.4
17
86
0
53
42
2
2
52
1.28
2660193--2660233
19
2.2
19
86
0
55
48
0
4
46
1.23
2662397--2662433
2
18.5
2
88
0
56
43
0
2
54
1.14
2683117--2683149
2
16.5
2
100
0
66
48
0
0
51
1.00
2693338--2693384
23
2.0
23
87
0
67
38
0
0
61
0.96
2693345--2693412
29
2.2
31
84
7
86
36
2
0
60
1.12
2693444--2693533
30
3.0
29
80
6
90
53
3
7
35
1.46
2695550--2695704
76
2.0
76
92
0
256
36
21
13
28
1.92
2706269--2706365
34
2.9
34
80
7
117
47
8
3
41
1.49
2710590--2710615
12
2.2
12
100
0
52
30
0
38
30
1.58
2712253--2712278
2
13.0
2
100
0
52
50
0
0
50
1.00
2713963--2714022
17
3.1
20
72
20
56
36
3
3
56
1.32
2714039--2714078
2
20.0
2
100
0
80
0
50
0
50
1.00
2714245--2714288
23
2.0
23
82
13
56
61
0
6
31
1.22
2718522--2718561
14
2.9
14
84
0
53
42
50
2
5
1.37
2718597--2718634
18
2.1
18
90
0
58
44
5
7
42
1.56
2718584--2718635
24
2.2
24
82
0
68
42
3
11
42
1.59
2721777--2721842
29
2.3
29
91
0
105
28
10
6
54
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2733774--2733814
2
20.5
2
94
0
73
51
0
48
0
1.00
2735498--2735533
2
18.0
2
100
0
72
50
0
0
50
1.00
2738942--2738995
23
2.3
24
84
6
67
53
0
1
44
1.11
2741975--2742066
33
2.7
33
80
8
96
50
1
1
47
1.15
2747450--2747489
11
3.6
11
89
0
62
20
0
30
50
1.49
2762540--2762579
15
2.6
16
84
8
55
62
0
2
35
1.09
2762575--2762647
33
2.2
32
76
11
76
58
0
4
36
1.17
2762567--2762618
25
2.0
27
81
11
63
53
0
5
40
1.25
2762593--2762703
30
3.7
29
68
21
77
55
1
0
41
1.16
2762559--2762714
59
2.7
56
84
9
206
53
1
2
41
1.25

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131