Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167827.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_10, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24162007

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   

This is table  31  of  131  ( 15626 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7248799--7248832
18
1.9
17
88
5
50
41
0
0
58
0.98
7248802--7248850
17
2.6
19
75
21
50
36
2
2
59
1.21
7248889--7248941
15
4.0
14
76
20
60
43
0
5
50
1.25
7248896--7248947
11
4.4
12
79
13
63
44
1
3
50
1.31
7248893--7248946
24
2.3
24
93
3
92
44
1
3
50
1.30
7249049--7249089
11
4.0
11
75
18
52
46
0
12
41
1.41
7249023--7249084
19
3.4
19
86
8
94
46
0
12
40
1.42
7251455--7251512
28
2.1
28
83
3
73
41
1
0
56
1.09
7251423--7251490
22
2.9
24
72
16
63
47
1
0
51
1.09
7251786--7251833
16
2.7
19
81
12
57
52
0
0
47
1.00
7251972--7252030
21
2.8
21
76
0
64
38
1
0
59
1.08
7254315--7254351
18
2.1
18
94
0
65
37
5
18
37
1.74
7254606--7254793
98
1.9
98
95
2
342
40
7
9
42
1.66
7255971--7256050
34
2.4
34
84
0
97
38
11
15
35
1.83
7267993--7268082
39
2.3
39
86
5
119
28
8
15
46
1.76
7267953--7268459
113
4.4
114
74
11
403
27
13
16
41
1.87
7268337--7268425
39
2.3
39
84
3
108
25
11
19
43
1.84
7268272--7268476
112
1.8
114
81
7
256
26
16
17
40
1.90
7268634--7268785
81
1.9
80
84
4
207
28
11
17
43
1.83
7268614--7268798
40
4.6
40
83
4
228
25
12
17
43
1.85
7268336--7269159
360
2.3
359
87
3
1158
28
14
16
39
1.88
7268940--7269007
34
2.0
34
82
0
82
25
14
20
39
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7268974--7269372
40
9.9
40
80
4
417
26
14
17
41
1.88
7268974--7269372
121
3.3
120
83
2
478
26
14
17
41
1.88
7268974--7269380
81
5.1
80
83
3
460
26
14
17
41
1.88
7272312--7272438
18
7.1
18
69
15
93
29
4
32
33
1.78
7272391--7272433
21
2.0
21
90
0
68
30
2
39
27
1.69
7272777--7272805
14
2.0
15
93
6
51
27
48
0
24
1.51
7276232--7276280
25
1.9
26
91
4
82
40
10
2
46
1.49
7281053--7281096
19
2.4
18
84
3
52
9
6
2
81
0.94
7281074--7281107
9
3.7
9
92
4
50
0
5
5
88
0.64
7281055--7281099
21
2.2
21
84
7
58
6
6
2
84
0.85
7282162--7282197
3
12.0
3
100
0
72
33
0
0
66
0.92
7282535--7282917
43
8.8
43
80
5
340
43
16
14
25
1.86
7282543--7282918
88
4.3
87
81
5
366
43
15
14
25
1.85
7282609--7282919
131
2.4
129
80
6
349
44
14
14
26
1.84
7284581--7284635
13
4.3
13
80
15
62
5
18
0
76
0.97
7284613--7284655
11
4.0
11
78
6
52
4
9
0
86
0.71
7284618--7284668
14
3.5
15
81
10
54
7
9
0
82
0.85
7284613--7284655
21
2.1
21
86
4
61
4
9
0
86
0.71
7289068--7289113
20
2.3
20
85
3
58
17
6
0
76
1.00
7289079--7289116
20
1.9
20
94
0
67
10
7
0
81
0.87
7289077--7289117
13
3.1
13
89
3
55
12
7
0
80
0.90
7289213--7289262
25
2.0
25
88
7
75
38
8
6
48
1.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7290332--7290357
8
3.2
8
100
0
52
76
0
0
23
0.78
7290862--7290902
21
2.0
21
85
9
57
65
0
4
29
1.13
7292542--7292574
16
2.1
16
88
11
50
36
6
6
51
1.51
7297707--7297778
37
1.9
37
91
5
119
37
0
1
61
1.05
7297743--7297769
4
6.8
4
100
0
54
25
0
0
74
0.83
7297607--7297816
108
2.0
104
91
5
341
42
2
0
54
1.20
7297759--7297812
24
2.1
24
83
10
63
48
3
0
48
1.19
7315161--7315314
54
2.9
54
78
3
157
25
27
16
30
1.96
7337006--7337044
11
3.4
11
83
13
51
84
0
10
5
0.76
7337974--7338431
39
11.7
39
79
8
353
26
10
15
47
1.78
7337973--7338431
79
5.9
79
79
7
436
26
10
15
47
1.77
7337973--7338337
118
3.1
116
83
5
441
28
10
14
46
1.77
7338569--7338627
31
1.9
31
92
0
100
27
27
16
28
1.97
7340419--7340461
22
1.9
23
85
4
61
62
0
6
30
1.21
7341806--7342039
121
1.9
122
84
6
310
45
17
8
28
1.78
7346313--7346357
21
2.1
21
95
0
81
46
6
17
28
1.73
7348401--7348464
2
32.5
2
87
3
94
51
4
0
43
1.22
7349344--7349379
3
12.0
3
100
0
72
66
0
0
33
0.92
7351269--7351328
29
2.1
29
84
6
77
50
0
3
46
1.18
7351284--7351343
27
2.1
28
85
11
79
48
0
0
51
1.00
7351470--7351507
16
2.3
16
90
4
58
47
2
2
47
1.30
7355293--7355334
17
2.4
17
96
4
75
14
9
9
66
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7357106--7357250
78
1.9
76
80
5
166
49
4
4
41
1.43
7357205--7357261
21
2.8
20
75
19
55
49
5
5
40
1.48
7357286--7357633
175
2.0
176
98
1
682
55
5
8
30
1.53
7357791--7357876
42
2.1
40
82
4
100
46
9
9
34
1.68
7357888--7357968
37
2.2
38
84
8
105
51
8
1
38
1.41
7358791--7358827
18
2.0
19
89
5
58
37
0
0
62
0.96
7368931--7368974
21
2.1
21
87
8
63
36
2
13
47
1.56
7376785--7376849
32
2.1
31
85
8
87
38
1
0
60
1.07
7376787--7376849
33
2.0
33
87
6
94
38
1
0
60
1.07
7378035--7378086
17
3.1
17
77
2
61
7
15
0
76
0.99
7380412--7380539
54
2.3
53
80
11
134
28
8
13
50
1.71
7380815--7380843
15
1.9
15
100
0
58
62
17
6
13
1.52
7380816--7380850
15
2.3
15
90
0
52
68
14
2
14
1.32
7381375--7381501
68
1.9
68
88
3
193
41
13
6
38
1.70
7388042--7388081
19
2.1
19
100
0
80
47
10
32
10
1.70
7390701--7390762
31
2.0
31
96
0
115
22
17
12
46
1.82
7392992--7393206
116
1.9
116
86
5
310
37
13
10
38
1.79
7393552--7393611
27
2.3
26
80
11
68
45
5
0
50
1.23
7393715--7393767
27
2.0
27
88
0
79
45
0
5
49
1.26
7394561--7394591
3
10.3
3
100
0
62
64
0
0
35
0.94
7395487--7395549
29
2.1
29
82
2
72
60
4
1
33
1.27
7395526--7395589
20
3.2
20
74
21
64
60
7
0
31
1.25
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7395619--7395664
19
2.4
18
82
10
56
56
4
2
36
1.31
7395632--7395681
20
2.5
20
83
9
57
54
2
4
40
1.31
7395725--7395785
19
3.3
18
76
19
63
22
1
3
72
1.09
7395747--7395786
17
2.4
16
87
4
53
22
0
2
75
0.93
7395761--7395854
37
2.6
37
80
11
88
37
3
3
56
1.31
7395935--7395999
17
3.8
17
73
15
53
30
0
4
64
1.14
7396047--7396089
19
2.2
19
87
8
59
37
0
6
55
1.27
7396047--7396085
10
3.8
10
82
3
51
35
0
5
58
1.20
7400475--7400536
23
2.6
24
76
21
60
75
4
1
17
1.05
7400858--7401244
43
8.7
45
79
6
256
44
18
14
23
1.86
7400857--7401328
44
10.8
45
76
8
305
44
18
13
23
1.86
7400857--7401332
89
5.4
85
78
9
372
44
18
13
23
1.85
7400902--7401332
43
9.9
43
78
9
322
44
17
13
24
1.85
7400885--7401332
132
3.4
132
84
5
493
45
16
13
23
1.84
7401739--7401780
21
2.0
21
95
0
75
38
16
9
35
1.81
7402198--7402333
71
1.9
71
80
3
157
30
22
9
37
1.86
7402949--7403061
18
6.7
17
71
12
90
8
16
0
73
1.13
7403007--7403086
10
8.3
10
84
13
82
11
8
1
78
1.01
7402949--7403061
26
4.5
25
72
17
83
8
16
0
73
1.13
7402949--7403061
34
3.4
34
81
8
133
8
16
0
73
1.13
7402949--7403061
8
13.5
8
77
14
86
8
16
0
73
1.13
7403007--7403086
33
2.4
33
87
6
108
11
8
1
78
1.01
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7405242--7405678
64
6.7
65
73
11
284
38
12
12
35
1.82
7405275--7405417
71
2.0
72
90
1
225
41
14
12
31
1.83
7405347--7405678
63
5.2
65
75
6
291
38
12
12
36
1.81
7405681--7406012
62
5.3
61
66
22
147
38
15
12
34
1.84
7405654--7406043
191
2.0
191
97
0
735
38
15
12
33
1.85
7406175--7406329
63
2.5
62
79
6
170
37
14
11
36
1.82
7413060--7413106
24
2.0
24
83
8
60
55
0
2
42
1.12
7413308--7413448
69
2.0
69
93
0
237
48
9
16
24
1.76
7416241--7416283
2
22.0
2
95
4
79
51
0
0
48
1.00
7416777--7416856
40
2.0
40
97
0
151
53
20
7
18
1.68

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131