Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167827.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_10, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24162007

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   

This is table  126  of  131  ( 15626 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22902001--22902209
104
2.0
104
92
1
348
25
32
18
23
1.97
22902105--22902259
81
1.9
82
90
4
251
27
31
17
23
1.97
22901912--22902330
185
2.3
183
85
5
565
25
32
17
24
1.97
22902435--22902488
25
2.2
25
96
0
99
38
18
9
33
1.83
22906130--22906182
15
3.7
15
82
14
67
13
0
18
67
1.22
22906126--22906176
6
8.5
6
84
0
57
13
0
19
66
1.24
22906139--22906179
3
13.7
3
84
0
55
7
0
24
68
1.15
22906126--22906179
18
3.0
18
91
0
81
12
0
20
66
1.24
22906251--22906308
23
2.4
25
83
11
68
29
10
13
46
1.77
22906414--22906438
6
4.2
6
100
0
50
16
32
32
20
1.94
22918564--22918602
20
2.0
20
89
0
60
38
17
23
20
1.93
22918663--22918726
25
2.5
25
92
2
101
42
10
9
37
1.73
22923591--22923616
3
8.7
3
100
0
52
30
0
0
69
0.89
22924090--22924140
19
2.7
19
78
0
57
37
1
1
58
1.20
22924132--22924179
23
2.1
23
92
7
80
47
2
0
50
1.12
22924490--22924556
34
2.0
34
85
11
93
52
5
1
40
1.35
22924542--22924573
14
2.3
14
94
0
55
71
0
0
28
0.86
22936245--22936288
19
2.5
17
82
10
52
56
0
0
43
0.99
22936252--22936287
19
1.9
18
88
5
54
55
0
0
44
0.99
22936319--22936347
13
2.1
14
93
6
51
37
0
3
58
1.15
22943115--22943140
2
13.0
2
100
0
52
50
0
0
50
1.00
22944982--22945015
17
1.9
18
88
5
52
47
2
2
47
1.32
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22944946--22945415
59
8.0
58
87
5
585
38
9
4
46
1.59
22945450--22945507
20
2.9
20
73
14
57
72
12
0
15
1.12
22946033--22946087
28
2.0
28
82
6
69
9
18
5
67
1.38
22946038--22946094
28
2.1
26
80
6
60
10
19
3
66
1.36
22946443--22946609
40
4.1
40
79
8
169
43
19
11
25
1.84
22946448--22946608
81
2.0
84
84
8
215
43
19
11
24
1.85
22946891--22947270
114
3.3
114
85
3
487
33
15
14
36
1.88
22947336--22947392
20
2.8
21
89
2
80
35
14
10
40
1.80
22947357--22947491
58
2.3
58
87
0
198
31
16
14
38
1.88
22947437--22947648
79
3.0
67
76
17
237
36
15
11
36
1.83
22947542--22947595
20
2.6
21
82
2
65
37
14
11
37
1.82
22947499--22947734
79
3.0
79
90
0
373
35
16
9
38
1.81
22947621--22947674
20
2.6
21
75
13
58
40
12
9
37
1.76
22947697--22947897
21
9.0
21
72
20
113
39
13
6
39
1.72
22947697--22947918
46
4.9
46
82
2
254
38
13
7
40
1.72
22947697--22947966
92
3.0
91
81
6
293
38
13
8
39
1.75
22947725--22947970
71
3.5
71
76
10
211
39
13
8
39
1.74
22949198--22949302
36
2.8
35
80
11
111
10
14
0
75
1.05
22949214--22949292
10
8.1
10
85
14
96
10
11
0
78
0.97
22949198--22949305
9
11.8
9
76
17
98
11
14
0
74
1.08
22953074--22953186
56
2.0
57
94
1
201
46
0
16
36
1.54
22953213--22953618
58
7.0
58
86
5
520
37
8
5
48
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22953213--22953597
59
6.6
57
86
5
474
38
9
5
47
1.58
22953419--22953454
16
2.2
16
90
0
54
44
0
5
50
1.25
22953508--22953597
27
3.2
27
64
20
67
41
13
3
42
1.60
22954313--22954371
28
2.2
26
84
6
73
5
16
8
69
1.32
22954339--22954385
20
2.3
20
85
0
58
2
17
10
70
1.26
22954320--22954372
28
2.0
28
88
7
83
3
15
11
69
1.31
22956925--22956976
27
1.9
27
88
0
77
51
0
1
46
1.12
22960268--22960302
16
2.2
16
94
0
61
51
17
17
14
1.77
22963522--22963587
29
2.3
30
82
10
75
45
3
1
50
1.26
22963550--22963625
29
2.6
28
81
8
73
48
2
1
47
1.24
22963677--22963715
19
2.1
19
90
0
60
28
7
0
64
1.21
22964106--22964130
12
2.1
12
100
0
50
36
0
8
56
1.29
22964155--22964218
27
2.6
24
80
9
76
42
0
0
57
0.98
22965281--22965322
22
1.9
22
85
9
59
40
2
0
57
1.12
22967025--22967084
16
3.9
16
72
10
54
45
0
0
55
0.99
22967037--22967079
15
2.9
15
73
13
52
46
0
0
53
1.00
22969586--22969626
18
2.2
19
87
12
59
60
2
4
31
1.30
22969683--22969752
31
2.2
32
89
2
106
35
7
4
52
1.48
22969693--22969787
31
3.0
32
84
6
104
38
6
6
48
1.54
22969846--22969889
9
4.8
9
81
13
54
52
0
2
45
1.13
22975498--22975544
24
1.9
25
83
12
62
48
2
0
48
1.13
22977528--22977557
9
3.2
9
95
4
51
63
0
0
36
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22977530--22977559
10
3.1
10
95
4
53
63
0
0
36
0.95
22986955--22987020
27
2.4
27
94
0
114
24
10
18
46
1.80
22987226--22987257
2
16.0
2
100
0
64
50
0
0
50
1.00
22999504--22999548
21
2.1
21
100
0
90
42
15
17
24
1.88
23001619--23001677
29
2.1
29
90
3
93
44
5
0
50
1.24
23001996--23002046
21
2.5
19
74
20
50
58
1
1
37
1.20
23003914--23003943
13
2.3
13
94
0
51
43
13
0
43
1.43
23017843--23017870
14
2.0
14
100
0
56
21
28
7
42
1.79
23018083--23018140
19
3.1
19
71
0
53
1
29
3
65
1.19
23020220--23020272
19
2.7
20
77
11
65
47
3
1
47
1.31
23020246--23020395
30
4.6
30
72
19
108
38
5
3
53
1.40
23020589--23020640
24
2.1
23
82
13
59
48
0
5
46
1.26
23027794--23027837
13
3.6
13
82
11
58
63
0
4
31
1.14
23029411--23029482
32
2.3
32
80
2
83
43
0
1
55
1.08
23029948--23030002
28
2.0
28
96
0
101
29
0
18
52
1.45
23034443--23034486
22
2.0
22
95
0
79
31
11
13
43
1.80
23045151--23045188
20
1.9
20
88
0
58
31
10
5
52
1.58
23046314--23046345
12
2.4
14
80
20
50
50
25
0
25
1.50
23053568--23053606
8
4.9
8
87
12
62
35
2
0
61
1.10
23053568--23053613
16
2.9
16
75
18
51
34
2
0
63
1.07
23053601--23053643
19
2.3
19
84
8
52
30
2
4
62
1.28
23053673--23053719
21
2.2
21
80
0
58
31
6
8
53
1.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23053731--23053801
11
6.4
11
75
8
63
22
2
1
73
1.05
23053763--23053812
22
2.2
22
85
7
64
24
6
4
66
1.32
23053742--23053829
44
2.0
43
82
6
106
26
4
3
65
1.27
23054596--23054635
19
2.1
19
86
9
55
45
5
5
45
1.47
23054709--23054747
16
2.5
16
87
4
53
56
2
0
41
1.13
23054950--23055094
73
2.0
73
91
0
236
44
3
4
46
1.41
23059740--23059822
41
2.1
39
80
15
89
48
1
4
45
1.31
23060264--23060288
9
2.8
9
100
0
50
92
0
0
8
0.40
23060305--23060343
16
2.5
16
83
4
53
25
2
5
66
1.25
23060469--23060526
20
2.6
22
78
18
66
56
0
1
41
1.09
23061157--23061214
26
2.3
24
79
8
62
63
1
0
34
1.04
23062029--23062063
17
2.1
17
94
0
61
40
5
22
31
1.78
23062437--23062629
62
3.1
62
76
10
203
38
6
9
45
1.63
23064963--23065025
11
5.6
11
77
9
65
47
17
0
34
1.48
23064971--23065035
33
2.0
33
90
0
103
44
16
1
36
1.58
23069516--23069594
41
1.9
41
92
5
133
50
7
3
37
1.49
23071172--23071201
16
1.9
15
100
0
51
36
16
0
46
1.47
23073694--23074240
276
2.0
276
99
0
1085
27
15
16
39
1.89
23081225--23081280
29
2.0
28
86
10
78
35
3
0
60
1.14
23086476--23086517
20
2.0
21
90
4
68
66
0
0
33
0.92
23086783--23086829
25
2.0
23
87
8
67
48
4
0
46
1.21
23091825--23091861
18
2.1
18
100
0
74
21
40
16
21
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23094303--23094350
25
1.9
25
91
0
78
52
0
0
47
1.00
23094294--23094351
25
2.4
23
78
10
62
50
0
0
50
1.00
23094940--23094981
12
3.4
13
77
12
52
64
7
0
28
1.20
23109546--23109579
15
2.2
16
89
5
52
17
8
20
52
1.71
23109655--23109715
31
2.0
31
96
0
113
44
9
4
40
1.59
23111565--23111617
23
2.2
24
80
3
63
28
1
11
58
1.43
23126794--23126841
16
3.2
16
80
14
57
33
0
4
62
1.14
23130610--23130652
16
2.8
16
80
16
54
55
2
0
41
1.12
23131090--23131133
17
2.8
15
77
12
52
40
2
0
56
1.11
23135529--23135560
5
6.4
5
96
0
55
56
0
43
0
0.99

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131