Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167827.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_10, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24162007

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   

This is table  131  of  131  ( 15626 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24103143--24103196
26
2.0
28
82
7
67
61
9
0
29
1.27
24112474--24112606
50
2.8
49
79
11
127
49
15
18
16
1.80
24113262--24113569
119
2.6
120
84
3
404
16
22
14
46
1.83
24113262--24113674
119
3.4
119
81
4
402
17
21
14
46
1.84
24114045--24114153
3
36.0
3
77
1
110
31
5
2
60
1.34
24126669--24126766
33
3.0
33
85
5
110
31
19
16
32
1.94
24126679--24126809
66
2.0
66
80
5
149
32
19
14
33
1.92
24127091--24127176
34
2.5
36
84
5
106
33
11
11
43
1.77
24128235--24128275
3
14.3
3
80
10
50
31
0
2
65
1.05
24128222--24128275
17
3.3
15
85
10
63
29
0
3
66
1.09
24128829--24128874
17
2.7
17
96
0
83
65
4
2
28
1.23
24129246--24129287
3
14.0
3
94
0
57
59
0
7
33
1.25
24129307--24129340
14
2.4
14
90
0
50
47
2
0
50
1.16
24135514--24135551
16
2.4
16
86
4
51
23
7
7
60
1.51
24136293--24136343
5
9.8
5
79
8
57
64
0
1
33
1.05
24136293--24136351
11
5.5
11
78
13
61
66
0
1
32
1.02
24136293--24136343
16
3.2
16
88
2
77
64
0
1
33
1.05
24136448--24136519
20
3.4
20
72
11
63
50
1
0
48
1.09
24136552--24136591
8
5.0
8
90
0
53
40
0
10
50
1.36
24137145--24137520
2
192.5
2
70
5
205
41
4
7
46
1.53
24137800--24137834
10
3.5
10
96
0
61
37
0
0
62
0.95
24137820--24137876
21
2.6
22
75
5
62
31
0
7
61
1.23
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24137877--24137903
13
2.1
13
100
0
54
70
0
0
29
0.88
24138104--24138134
2
15.5
2
93
0
53
3
48
0
48
1.17
24147385--24147612
118
1.9
118
82
1
287
28
21
25
25
1.99
24155828--24155936
45
2.4
45
81
6
114
24
30
22
22
1.99

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131

The End!